微生物材料開発室 (JCM)

Ref. No.	JCM strain No.	Title	Author	Journal	Vol.	Pages	Year	PMID	doi
A25001	JCM 35181	Reconstitution and Characterization of Biosynthetic Machinery for Parageocin I, a Novel Thiazole-Rich Peptide from the Thermophilic Bacterium Parageobacillus caldoxylosilyticus.	Yano A, Tomita H, Miyazaki K, Honda K	ACS Chem Biol	20	815-822	2025	40173184	10.1021/acschembio.4c00758
A25002	JCM 12392T	Lactose-Derived Glucolacto-Oligosaccharides Increase Specific Beneficial Bacteria in the Human Gut Microbiome.	Negishi H, Ishida J, Ichikawa A, Asami I, Hagiwara S, Ohtake J, Hojo K, Kano H, Makino S	ACS Food Sci Technol	5	3038–3046	2025		10.1021/acsfoodscitech.5c00316
A25003	JCM 1652, JCM 2151, JCM 20135	Amphibian-Derived Cathelicidin-DM and Cathelicidin-BG: Recombinant Overexpression in Escherichia coli and Comparison of Their Structures and Antimicrobial Activities.	Ezema C A, Shibagaki M, Kikukawa T, Arai T, Aizawa T	ACS Omega	10	21875-21888	2025	40488015	10.1021/acsomega.5c01923
A25004	JCM 9730T	Genetic Impacts on the Structure and Mechanics of Cellulose Made by Bacteria.	Laurent J M, Steinacher M, Kan A, Ritter M, Leutert M, Bienz S, Häberlin D, Kumar N, Studart A R	Adv Sci	12	e05075	2025	40470676	10.1002/advs.202505075
A25005	JCM 13569T, JCM 15429, JCM 15430	Inactivating effect of 222-nm far ultraviolet-C radiation on nontuberculous mycobacteria.	Kajiwara C, Kaigome R, Sasaki M, Koi T, Tateda K	Am J Infect Control	53	729-731	2025	39978597	10.1016/j.ajic.2025.02.009
C25006	JCM 33967T	Veillonella orientalis sp. nov., an anaerobic Gram-stain-negaitve coccus isolated from saliva of a Thai child.	Mashima-Usami I, Theodorea C F, Murata K, Thaweboon B, Thaweboon S, Nakazawa F	Anaerobe	91	102921	2025	39581455	10.1016/j.anaerobe.2024.102921
C25007	JCM 36566T, JCM 36567T, JCM 36662T	Description of three new Leptotrichia species isolated from dental biofilm: Leptotrichia rugosa sp. nov., Leptotrichia mesophila sp. nov. and Leptotrichia alba sp. nov.	Wang X, Jiao S-Y, Wang J, Wu R-R, Zhang T-T, Wang C-M, Li X-J	Anaerobe	92	102948	2025	40015666	10.1016/j.anaerobe.2025.102948
C25008	JCM 36186T	Characterization of Lachnoanaerobaculum sanguinis sp. nov., isolated from a blood culture of an acute myeloid leukemia patient with chemotherapy-related bacteremia.	Suenari Y, Matsubara T, Hiroshima Y, Pahlevi M R, Shimada H, Ochi Y, Okada N, Sato M, Fujii H, Sumitomo T, Kishimoto H, Murakami A	Anaerobe	93	102961	2025	40233837	10.1016/j.anaerobe.2025.102961
A25009	JCM 6425T, JCM 6473T, JCM 18909, JCM 18919T	Effects of common cosmetic ingredients on growth of dominant human skin inhabitant Cutibacterium acnes.	Funatsu O, Dekio I, Ishii H, Shimatsu R, Shimokawa Y, Asahina A	Anaerobe	96	102999	2025	40998087	10.1016/j.anaerobe.2025.102999
A25010	JCM 1649T	Lipoproteins from Bilophila wadsworthia cell wall induce innate immune responses through Toll-like receptor 2.	Yoshida C, Hagihara M, Azuma R, Iwasaki K, Nakamura A, Suematsu H, Tanaka K, Ariyoshi T, Oka K, Takahashi M, Yamagishi Y, Mikamo H	Anaerobe	96	103001	2025	41022182	10.1016/j.anaerobe.2025.103001
A25011	JCM 4372	Gromomycins: An Unprecedented Class of Triterpene Antibiotics Produced by a Novel Biosynthetic Pathway.	Tistechok S, Bratiichuk D, Sucipto H, Gummerlich N, Stierhof M, Gromyko O, Fries F, Fedorenko V, Müller R, Zapp J, Myronovskyi M, Luzhetskyy A	Angew Chem	64	e202422270	2025	40106406	10.1002/anie.202422270
A25012	JCM 13917T, JCM 18367T, JCM 18369T	Decoding the Chemical Language of Ribosomally Synthesized and Post-Translationally Modified Peptides from the Untapped Archaea Domain.	Song Z-M, Cai C, Gao Y, Lin X, Yang Q, Zhang D, Wu G, Liang H, Zhuo Q, Zhang J, Cai P, Jiang H, Liu W, Li Y-X	Angew Chem	64	e202501074	2025	40180612	10.1002/anie.202501074
A25013	JCM 4701	Nitramine Formation via a Cryptic Non-Ribosomal Peptide Synthetase-Dependent Strategy in N-Nitroglycine Biosynthesis.	Wang Y, Zhang J, Shi R, Zhou S, Chen S, Li R, Huang W, He H-Y	Angew Chem	64	e202507866	2025	40366104	10.1002/anie.202507866
A25014	JCM 2410T	Antimicrobial Evaluation and Fraction-Based Profiling of Basil Essential Oil Against Vaginal Pathogens.	Park M, Park J, Hwang D Y, Park S, Lee H	Antioxidants	14	628	2025	40563262	10.3390/antiox14060628
A25015	JCM 1027T, JCM 15110T, JCM 18803T, JCM 20914T	Properties of Plant Extracts from Adriatic Maritime Zone for Innovative Food and Packaging Applications: Insights into Bioactive Profiles, Protective Effects, Antioxidant Potentials and Antimicrobial Activity.	Babić P, Cvetnić T S, Čanak I, Dujmović M, Semenčić M , Šupljika F, Vranješ Z, Debeaufort F, Benbettaieb N, Descours E, Kurek M	Antioxidants	14	906	2025	40867805	10.3390/antiox14080906
C25016	JCM 36940T	Genomic and phenotypic characterisation of Leeuwenhoekiella obamensis sp. nov., a novel marine bacterium isolated from the surface water of a Japanese fishing port.	Machii Y, Tsukamoto M, Kataoka T, Kondo R	Antonie van Leeuwenhoek	118	49	2025	39869186	10.1007/s10482-025-02061-4
C25017	JCM 35938T	Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments.	Luo J, Zhang H, Ye Z, Li F, Zhong Z, Wang J, Wang M, Li C	Antonie van Leeuwenhoek	118	96	2025	40560427	10.1007/s10482-025-02110-y
A25018	JCM 30987T	Flavobacterium aestuarii sp. nov., a novel species isolated from the Pearl River Estuary.	Li Q, Peng Z-Q, Wang H-C, Dong L, Guo D-Y, Wang P-D, Luo X-Q, Luo Z-H, Yang Z-W, Li W-J	Antonie van Leeuwenhoek	118	101	2025	40601161	10.1007/s10482-025-02109-5
A25019	JCM 19471T	Desulfosporosinus sediminicola sp. nov., an acidophilic sulfate-reducing bacterium isolated from acidic sediments of a disused iron mine site.	Jiang S-F, Zhang C-Y, Lao X-W, Jia W-C, Yang T-T, Zhang S-Y, Xie Y-Y, Ye P-Z, Lan R, Lai Z-X, Yang Q, Huang L-N	Antonie van Leeuwenhoek	118	142	2025	40875059	10.1007/s10482-025-02152-2
B25020	JCM 17454T, JCM 18214T, JCM 36754T, JCM 36755T, JCM 37319T, JCM 37320T	Four novel species of the genus Aquimarina isolated from marine sponges: Aquimarina callyspongiae sp. nov., Aquimarina mycalae sp. nov., Aquimarina discodermiae sp. nov., and Aquimarina penaris sp. nov.	Moon Y-L, Han S-M, Kim K H, Park J-S	Antonie van Leeuwenhoek	118	150	2025	40913133	10.1007/s10482-025-02156-y
C25021	JCM 36079T	Genomic analysis of Arthrobacter endolithicus sp. nov. and Arthrobacter antibioticus sp. nov., two novel actinobacteria from Antarctica with potential application in aquaculture.	Ay H, Sahin S M, Saticioglu I B, Duman M	Antonie van Leeuwenhoek	118	180	2025	41145929	10.1007/s10482-025-02197-3
A25022	JCM 7371T	Sphingobium salicis sp. nov., a novel endophyte with two subspecies from pioneer plants growing on primary substrates.	ournay R J, Freeman J L, Levish M, Baker D, Firrincieli A, Doty S L	Antonie van Leeuwenhoek	119	16	2025	41417106	10.1007/s10482-025-02214-5
A25023	JCM 19398T, JCM 31416T	Marinobacter liaoningensis sp. nov., isolated from the marine sediment.	Wang J, Zhu Z, Zhu J, Shen C, Liu J, Peng Z, Yang B, Zhang Y, Fang Z	Antonie van Leeuwenhoek	119	20	2025	41436668	10.1007/s10482-025-02234-1
C25024	JCM 35956, JCM 35957T	Genomic insights into Marinospirillum alkalitolerans sp. nov., a novel PHB producing bacterium from an Indian impact crater, and an emended description of family Oceanospirillaceae.	Joshi A, Thite S, Godbole D, Boruah D, Sindhu D K, Prabhu A, Joseph N, Yadav A, Sharma A, Lodha T	Antonie van Leeuwenhoek	118	53	2025	39928221	10.1007/s10482-024-02059-4
C25025	JCM 36414T	Streptomyces adonidis sp. nov., a novel actinomycete strain with antifungal activity isolated from the root of Adonis amurensis Regel.	Du R, Bing H, Lu W, Gao C, Kong F, Wang H, Shen Y, Liu C, Xiang W	Antonie van Leeuwenhoek	118	62	2025	40133458	10.1007/s10482-025-02073-0
C25026	JCM 34221T	A novel carotenoid-producing bacterium, Paenibacillus roseopurpureus sp. nov., isolated from Korean marine mud.	Hwang C Y, Cho E-S, Nam Y-D, Park S-L, Lim S-I, Seo M-J	Antonie van Leeuwenhoek	118	67	2025	40205261	10.1007/s10482-025-02077-w
C25027	JCM 36422T	Gracilibacillus pellucidus sp. nov., a moderately halophilic bacterium isolated from saline soil in Xinjiang province, China.	Zhang Z, Wang H, Xia M, Li W, Zhang P, Wang Y, Liu L, Li P, Zhuang Y, Tan F	Antonie van Leeuwenhoek	118	72	2025	40261433	10.1007/s10482-025-02084-x
C25028	JCM 36429T	Paracoccus yibinensis sp. nov., a novel bacterium with astaxanthin producing isolated from the environment of Chinese distilled Baijiu.	Luo Q, Lu Y, Li X, Su J, Zhao P, Zhang Z, Gu Y, Zhao D, Zheng J	Antonie van Leeuwenhoek	118	74	2025	40268785	10.1007/s10482-025-02082-z
C25029	JCM 34508T	Genomic insights into Neopusillimonas aestuarii sp. nov., a novel estuarine bacterium with adaptations for ectoine biosynthesis and stress tolerance.	Kirdat K, Patwekar U, Jain K, Mubarak M, Choudhary P, Thakkar L, Thorat V, Madamwar D, Lodha T, Yadav A	Antonie van Leeuwenhoek	118	82	2025	40418388	10.1007/s10482-025-02093-w
B25030	JCM 18552T, JCM 34784T	Robertkochia aurantiaca sp. nov., and Robertkochia flava sp. nov., two potential quinate- and catechol-degrading bacteria isolated from tidal-flat sediments.	Jayan J N, Lee Y-M, You Y-J, Srinivasan S, Lee S-S	Antonie van Leeuwenhoek	118	105	2025	40622654	10.1007/s10482-025-02102-y
A25031	JCM 1465T, JCM 3201T	Single-cell pigment analysis of phototrophic and phyllosphere bacteria using simultaneous detection of Raman and autofluorescence spectra.	Kanno N, Shigeto S	Appl Environ Microbiol	91	e0012925	2025	40207966	10.1128/aem.00129-25
A25032	JCM 1198	Ethanolphilic lactic acid bacterium Fructilactobacillus fructivorans as the key microorganism for fermentation of narazuke, a traditional Japanese preserved food.	Yoshioka M, Akasaka N, Masuda Y, Mori M, Watanabe D	Appl Environ Microbiol	91	e0173025	2025	41251343	10.1128/aem.01730-25
A25033	JCM 1464T, JCM 15447T, JCM 30616T	Enrichment isolation and metabolic characteristics of Halobacteriovorax, cosmopolitan obligate predators in marine conditions.	Yu Q, Wang F-Q, Zhou Z-Y, Ye Y-Q, Xu Z, Lu D-C, Du Z-J	Appl Environ Microbiol	91	e0193525	2025	41222289	10.1128/aem.01935-25
A25034	JCM 15439T	Generation of novel prebiotic oligosaccharide pools from fiber drives biological insight in bacterial glycan metabolism.	Masarweh C, Maldonado-Gomez M, Paviani B, Bhattacharya M, Weng C-Y, Suarez C, Ehlers-Cheang S, Stacy A, Castillo J, Krishnakumar N, Kalanetra K A, Barile D, German J B, Lebrilla C B, Mills D A	Appl Environ Microbiol	91	e0207724	2025	39912642	10.1128/aem.02077-24
A25035	JCM 1115T, JCM 1149T, JCM 1154T, JCM 1166T, JCM 1173T, JCM 5671T, JCM 5705T, JCM 5818T, JCM 6124T, JCM 7879T, JCM 8726T, JCM 8797T, JCM 12516T, JCM 15040T, JCM 16167T, JCM 18985T, JCM 18986T, JCM 18987T	Characterization of plasmalogen production in facultative anaerobic bacteria and aerobic synthesis in recombinant Escherichia coli expressing anaerobic bacterium-derived plasmalogen synthase genes	Irimajiri R, Kuwabara M, Ishibashi Y, Ano S, Fujino Y, Honsho M, Fukami K, Mawatari S, Fujino T, Doi K	Appl Environ Microbiol	92	e0094025	2025	41427725	10.1128/aem.00940-25
A25036	JCM 15631T, JCM 17582T	A reverse transcription-quantitative polymerase chain reaction system for evaluating intestinal butyrate production by fecal bacteria.	Hane M, Shimamoto K, Matsui R, Shimizu K, Katto M, Asahara T, Shishido Y, Kurakawa T	Appl Environ Microbiol	92	e0183625	2025	41384910	10.1128/aem.01836-25
A25037	JCM 3825T, JCM 7524, JCM 9717, JCM 9904, JCM 33214	Novel method for predicting the risk of spoilage by lactic acid bacteria during the storage of Japanese sake.	Takahashi M, Morikawa K, Akao T	Appl Food Res	5	100835	2025		10.1016/j.afres.2025.100835
A25038	JCM 1157T, JCM 2257T, JCM 5803T, JCM 5885, JCM 5887T	Distribution of Bacteriocin-like Substance-Producing Lactic Acid Bacteria in Egyptian Sources.	Maky M A, Ishibashi N, Gong X, Sonomoto K, Zendo T	Appl Microbiol	5	20	2025		10.3390/applmicrobiol5010020
A25039	JCM 1391T	Impact of Clostridium butyricum HADIG-CB003 dietary supplementation on the gut microbiota of Kunming mice.	Pang Y, Xu X, Li D, Ge Y, Liang J, Xiong X, Wen S, Li X, Wang Y, Li X, Tan G, Lin Y	Appl Microbiol Biotechnol	109	237	2025	41143997	10.1007/s00253-025-13546-7
A25040	JCM 1190T, JCM 1200T, JCM 1205T	Phosphoserine phosphatase B facilitates indole metabolism to indole-3-lactic acid.	Konishi H, Matsui R, Okamura T, Imahase A, Kobayashi T, Nishiyama H	Appl Microbiol Biotechnol	109	252	2025	41326858	10.1007/s00253-025-13641-9
A25041	JCM 5705T	Antibacterial crystalline bilayers constructed on dentin substrates via laser-assisted mineralization: characterization and functional implications.	Onuma K, Makino M, Nakamura M, Nishida E, Shitomi K, Tanaka S, Miyaji H, Oyane A	Appl Surf Sci	711	164117	2025		10.1016/j.apsusc.2025.164117
A25042	JCM 5593, JCM 9928, JCM 22801, JCM 22802, JCM 22803, JCM 23043	Organic Acid Production Efficiency of Different Phosphate Solubilizing Talaromyces Pinophilus Strains.	Majumder M S I, Sano A, Akamine H, Majumder S I, Onjo M, Gima S, Hossain M	Applied Ecology and Environmental Research	23	097-108	2025		10.15666/aeer/2301_097108
C25043	JCM 37094T, JCM 37095T, JCM 37096T, JCM 37100T	Aquirufa esocilacus sp. nov., Aquirufa originis sp. nov., Aquirufa avitistagni, and Aquirufa echingensis sp. nov. discovered in small freshwater habitats in Austria during a citizen science project.	Pitt A, Lienbacher S, Schmidt J, Neumann-Schaal M, Wolf J, Oren A, Reichl S, Hahn M W	Arch Microbiol	207	71	2025	39998640	10.1007/s00203-025-04275-6
C25044	JCM 37304T	Salinicoccus bachuensis sp. nov., a novel halophilic bacterium, isolated from rhizosphere soil surrounding Tamarix chinensis Lour. plants in Bachu County, Xinjiang, China.	Liang Z-P, Wang R, Cao H-W, Zhou X-L, Dai J-P, Su P, Singh D, Zhang X-X	Arch Microbiol	207	112	2025	40178660	10.1007/s00203-025-04315-1
A25045	JCM 1465T	Characterization of the NRPS operon homolog for surfactin A and surfactin C synthesis in Bacillus spp.	Ito K, Adachi M, Matsutani M, Kataoka R, Enomoto G, Kajikawa A, Yokota K	Arch Microbiol	207	161	2025	40439731	10.1007/s00203-025-04341-z
A25046	JCM 1132T, JCM 1157T, JCM 1207T, JCM 1231T, JCM 5803T, JCM 11019T	The mechanism of action of nisin in promoting poultry through tight junction integrity and dendritic cell anti-inflammatory properties.	Uehara A, Maekawa M, Nakagawa K	Arch Microbiol	207	165	2025	40464952	10.1007/s00203-025-04364-6
A25047	JCM 1132T, JCM 1190T, JCM 1231T, JCM 1558T, JCM 5803T, JCM 6421T, JCM 11019T	L-Tyrosine enhances tight junction integrity and anti-inflammatory properties: a potential alternative to antibiotic growth promoters in broilers.	Uehara A, Maekawa M, Nakagawa K	Arch Microbiol	207	329	2025	41134334	10.1007/s00203-025-04522-w
C25048	JCM 35468T	Parabacteroides absconsus sp. nov., isolated from feces of a child with atopic dermatitis.	Chaplin A V, Pikina A P, Shcherbakova V A, Sokolova S R, Podoprigora I V, Das M S, Koshkin F A, Ilyina G A, Vasiliadis I A, Efimov B A	Arch Microbiol	207	25	2025	39757252	10.1007/s00203-024-04221-y
A25049	JCM 1157T	Evaluation of probiotic functional properties of Pediococcus pentosaceus BBS1 and Lactiplantibacillus plantarum BBS13 strains isolated from Lao traditional fermented bamboo shoots (Nor mai som).	Botthoulath V, Dalmacio IF, Elegado FB, Lantican NB, Villegas LC, Diaz MGQ	Asia-Pacific Journal of Science and Technology	30	APST-30-02-11	2025		10.14456/apst.2025.26
A25050	JCM 1255T, JCM 10413T	Dysbiosis involving methionine and PPAR-γ pathwaysis associated with early onset atopic dermatitis and food allergy.	Senavonge A, Nakphaichit M, Vongsangnak W, Roytrakul S, Patumcharoenpol P, Kingkaw A, Wongoutong C, Weerapakorn W, Pornputtapong N, La-Ongkham O, Poovorawan Y, Wanlapakorn N, Kittipongpattana P, Nitisinprasert S, Chatchatee P, Suratannon N	Asian Pac JAllergy and Immunol	43	908-920	2025	39955638	10.12932/AP-131223-1749
A25051	JCM 1471T	The specificity of family 4 carbohydrate-binding modules (CBMs) of BpGH16MLG influences the binding and utilization of β-glucans in a human gut bacterium, Blautia producta.	Gupta H, Gajera C, Kumari P, Singh R P	Bioact Carbohydr Dietary Fibre	33	100475	2025		10.1016/j.bcdf.2025.100475
A25052	JCM 1217T, JCM 1471T, JCM 31261	Enzymatic synthesis of analogous human milk oligosaccharide and its prebiotic attributes.	Niharika , Italiya B, Singh R P	Bioact Carbohydr Dietary Fibre	34	100479	2025		10.1016/j.bcdf.2025.100479
A25053	JCM 6985T	Integration of rosemary oil (Rosmarinus officinalis L.) into kefir: Phytochemical profiling and functional impacts.	Bayram O Y	Biocatalysis and Agricultural Biotechnology	70	103855	2025		10.1016/j.bcab.2025.103855
A25054	JCM 13569T	Mycobacterium abscessus resides within lipid droplets and acquires a dormancy-like phenotype in adipocytes.	Kurihara Y, Shimizu A, Ozuru R, Yoshimura M, Chou B, Itoh R, Ishii K, Hirota Y, Takagi S, Fujita M, Inoue M, Hiromatsu K	Biochem Biophys Res Commun	758	151645	2025	40120350	10.1016/j.bbrc.2025.151645
A25055	JCM 10556T	Restoration of gut integrity by Bacteroides acidifaciens in water-deprived conditions.	Fan S, Cai X, Cui W, Ma P, Wu M, Guo J, Zhang Y, Xuan K, Li Z	Biochem Biophys Res Commun	767	151917	2025	40318377	10.1016/j.bbrc.2025.151917
A25056	JCM 11548T	Importance of high temperature environment to maintain active form of arginine decarboxylase from hyperthermophilic archaeon Pyrobaculum calidifontis.	Maekawa K, Fujisaki D, Ishii Y, Fujiwara S	Biochem Biophys Res Commun	786	151917	2025	41027178	10.1016/j.bbrc.2025.152705
A25057	JCM 7783	Oral administration of Enterococcus faecalis to mice induces acute and chronic inflammation in the pancreas: possible involvement in the pathophysiology of pancreatic diseases.	Shimosaka M, Ishida Y, Takamatsu S, Ogata A, Nishikori K, Kondo J, Akita H, Eguchi H, Okamoto S, Miyoshi E	Biochem Biophys Res Commun	790	152880	2025	41176932	10.1016/j.bbrc.2025.152880
A25058	JCM 20276	Structural insights into the mechanism underlying the dual cofactor specificity of glyoxylate reductase from Acetobacter aceti in the β-hydroxyacid dehydrogenase family.	Majumder T R, Yoshizawa T, Inoue M, Aono R, Matsumura H, Mihara H	Biochim Biophys Acta Proteins Proteom	1873	141051	2025	39368682	10.1016/j.bbapap.2024.141051
A25059	JCM 2152T	Accelerated solvent extraction of high-purity lignin from sugarcane bagasse using sodium xylenesulfonate: Structural refinement and antibacterial-antioxidant enhancement.	Arunmas E, Rodklongtan A, Chitprasert P	Bioresour Technol	436	132988	2025	40669784	10.1016/j.biortech.2025.132988
A25060	JCM 10044T, JCM 11833	Capturing CO2 and flue gas carbon by Methanosarcina mazei Go1 and Methanothermobacter thermautotrophicus ΔH.	Sethuraman D, Paulchamy C	Bioresour Technol Rep	30	102149	2025		10.1016/j.biteb.2025.102149
A25061	JCM 1649T, JCM 1662T, JCM 2151, JCM 5803T, JCM 5962T, JCM 6841T	Novel compound, pleuropyronine, and other polyketides isolated from the edible mushroom Pleurotus ostreatus suppress bacterial biofilm formation.	Padua J C D, Kikuchi T, Sakakibara F, Leon A M D, Bungihan M E, Ueno K, Cruz T E E D, Ishihara A	Biosci Biotechnol Biochem	89	11–21	2025	39424595	10.1093/bbb/zbae148
A25062	JCM 3132	Characterization of N-malonylurea hydrolase in the pyrimidine oxidative degradation pathway of Rhodococcus erythropolis JCM 3132.	Deguchi K, Horinouchi N, Takeuchi M, Soong C-L, Shimizu S, Ogawa J	Biosci Biotechnol Biochem	89	1286-1292	2025	40522707	10.1093/bbb/zbaf083
A25063	JCM 1130, JCM 1131T, JCM 5814	A unique tetrasaccharide-containing anchor glycolipid of lipoteichoic acid is commonly found in Lactobacillus gasseri and Lactobacillus paragasseri.	Shiraishi T, Kutomi R, Sato Y, Endo A, Fukiya S, Takahashi S, Yokota A, Yokota S-I	Biosci Biotechnol Biochem	89	1382-1390	2025	40455590	10.1093/bbb/zbaf081
A25064	JCM 1192T, JCM 1200T, JCM 1205T, JCM 1217T, JCM 1275T, JCM 5819T, JCM 5821T, JCM 6291T, JCM 7042, JCM 8223T, JCM 8230T, JCM 11165T, JCM 13495T, JCM 15461T, JCM 15958T, JCM 16945T, JCM 17295T, JCM 17297T, JCM 17298T, JCM 17299T, JCM 18049T, JCM 30798T, JCM 30799T, JCM 30941T, JCM 30943T, JCM 30944T, JCM 31789T, JCM 31793T, JCM 32705T, JCM 32706T, JCM 33352T, JCM 33373T, JCM 34854T	Comprehensive analysis of cell-associated fatty acids in Bifidobacterium strains.	Murakami R, Xiao J-Z, Hara K Y, Odamaki T, Kikukawa H	Biosci Biotechnol Biochem	89	1700-1705	2025	41070936	10.1093/bbb/zbaf144
A25065	JCM 1012T, JCM 1093T, JCM 1096T, JCM 1115T, JCM 1134T, JCM 1149T, JCM 1164T, JCM 1173T, JCM 1716T, JCM 5666T, JCM 5668T, JCM 5707T, JCM 5805T, JCM 5890T, JCM 6124T, JCM 8723T, JCM 12532T, JCM 15949T, JCM 16176T, JCM 16178T	Challenge of validation in whole-cell spike-in amplicon sequencing to comprehensively quantify food lactic acid bacteriota.	Oshiro M, Nakamura K, Tashiro Y	Biosci Biotechnol Biochem	89	294–303	2025	39572080	10.1093/bbb/zbae173
A25066	JCM 1200T, JCM 1217T, JCM 1275T, JCM 1290T, JCM 1291T, JCM 1292T, JCM 1296T, JCM 5707T, JCM 5824T, JCM 5825T, JCM 5826T, JCM 5827T, JCM 5828T, JCM 6567T, JCM 7790, JCM 8532T, JCM 9496T, JCM 9497T, JCM 9498T, JCM 11019T, JCM 12243T, JCM 12986T, JCM 13265T, JCM 13345T, JCM 13406T, JCM 13471T, JCM 14655T, JCM 15631T, JCM 15633T, JCM 17463T, JCM 17582T, JCM 31915T	The effect of culturing temperature on the growth of the most dominant bacterial species of human gut microbiota and harmful bacterial species.	Shimokawa H, Sakakibara H, Ami Y, Hirano R, Kurihara S	Biosci Microbiota Food Health	44	182-195	2025	40171389	10.12938/bmfh.2024-087
A25067	JCM 13464T, JCM 35349T, JCM 35350, JCM 35352T	Genetic analysis of a β-1,3/1,4-glucan utilization gene cluster in Segatella copri JCM 13464T.	Oyama M, Hashimoto Y, Sagara Y, Kitamura N, Kishino S, Obinata H, Tomita H, Sugiyama Y	Biosci Microbiota Food Health	44	320-331	2025	41050161	10.12938/bmfh.2025-009
A25068	JCM 1217T, JCM 8532T, JCM 31915T	Additive effect of mixtures of multiple strains combining the effects of single strains on human gut microbiota in vitro.	Tsujikawa Y, Yamamoto J, Fukuda I, Sakane I	Biosci Microbiota Food Health	44	58-69	2025	39764492	10.12938/bmfh.2024-059
C25069	JCM 36587	Integrated genome mining and molecular networking uncover the biosynthetic potential of a novel mangrove-derived strain Streptomyces sp. B1866.	Jiang L, Hu W, Qin J, Teng B, Chen S, Zhang D, Lei H, Pan XL	BMC Genomics	26	762	2025	40835898	10.1186/s12864-025-11966-3
A25070	JCM 5964T, JCM 10562T	A novel ready-to-use loop-mediated isothermal amplification (LAMP) method for detection of Burkholderia mallei and B. pseudomallei.	Nakase M, Thapa J, Batbaatar V, Khurtsbaatar O, Enkhtuul B, Unenbat J, Lkham B, Fujita S, Koshikawa A, Tuanyok A, Saechan V, Higashi H, Hayashida K, Suzuki Y, Nakajima C, Kimura T	BMC Microbiol	25	36	2025	39838326	10.1186/s12866-024-03737-z
C25071	JCM 36707T	Genome mining and metabolite profiling illuminate the taxonomy status and the cytotoxic activity of a mangrove-derived Microbacterium alkaliflavum sp. nov.	Hu W-J, Deng L-X, Huang Y-Y, Wang X-C, Qing J-L, Zhu H-J, Zhou X, Zhou X-Y, Chu J-M, Pan X	BMC Microbiol	25	103	2025	40021979	10.1186/s12866-025-03801-2
A25072	JCM 19602T	Phylotaxonomic analysis uncovers underestimated species diversity within the genus Rossellomorea with description of selenium-resistant Rossellomorea yichunensis sp. nov.	Kong J, Fu Z, Zhang Q, Liu Y, Luo Z, Zhao Z, Liu L, Liu X, Xu D, Li X, Zhang D	BMC Microbiol	25	408	2025	40610858	10.1186/s12866-025-04138-6
A25073	JCM 10426T	Genomic insights into Gordonia diversity: proposal of three novel species (Gordonia. altitudinis sp. nov., Gordonia. ligustrum sp. nov., and Gordonia. pistacia sp. nov.) with distinct environmental and biomedical traits.	Li C-J, Zhang J, Su J, Yu L-Y, Chen H-H, Zhang Y-Q	BMC Microbiol	25	692	2025	41152715	10.1186/s12866-025-04362-0
C25074	JCM 37776T	Streptococcus lishijunsis sp. nov. isolated from feces of Apodemus Chevrieri in western china and its genome function analysis.	Zhou J, Gu T, Zhou J, Zeng X, Liu Y, Chen F, Hu Y, Li S	BMC Microbiol	25	625	2025	41039218	10.1186/s12866-025-04353-1
A25075	JCM 2803, JCM 2805, JCM 2806, JCM 10893T, JCM 14648T, JCM 14673, JCM 14674, JCM 16406T, JCM 20693	Compatibility of commercial fungicide formulations with plant-associated Methylobacterium.	Palberg D, Emery R J N	Can J Plant Sci	105	1-10	2025		10.1139/cjps-2024-0169
A25076	JCM 17581T	Ketogenic diet inhibits glioma progression by promoting gut microbiota-derived butyrate production.	Chen M-L, He Y, Dong X-H, Liu H-F, Yan Z-X, Lu X-L, Miao Q-Q, Zhao Q-N, Zhang H, Luo L, Wang S, Li J-Y, Xiang D-F, Lin Y, Li T-R, Zhou X-Y, Zhou Y-Y, Mao M, Zhang X, Wei H, Shi Y, Liu X-D, Ping Y-F, Bian X-W	Cancer Cell	43	2119-2135	2025		10.1016/j.ccell.2025.09.002ExternalLink
A25077	JCM 1194T, JCM 1217T	Structural analysis of gum arabic side chains from Acacia seyal released by bifidobacterial β-arabino-oligosaccharide 3-O-β-l-arabinopyranosyl-α-l-arabinofuranosidase.	Sasaki Y, Matsuo A, Hashiguchi M, Fujimura K, Koshino H, Tanaka K, Ito Y, Kitahara K, Ishiwata A, Fujita K	Carbohydr Polym	349	122965	2025	39643419	10.1016/j.carbpol.2024.122965
A25078	JCM 6985T	Utilization of agro-industrial byproducts as low-cost nutrient sources for production of kefiran and lactic acid by Lactobacillus kefiranofaciens.	Iadcharoen A, Cheirsilp B, Ruangwicha R, Srinuanpan S, Thong S O	Carbon Resources Conversion	8	100268	2025		10.1016/j.crcon.2024.100268
A25079	JCM 2410T, JCM 7512, JCM 18283T	Systematically investigating and identifying bacteriocins in the human gut microbiome.	Zhang D, Zou Y, Shi Y, Zhang J, Liu J, Wu G, Zhang J, Gao Y, Chen M, Li Y-X	Cell Genomics	5	100983	2025	40902606	10.1016/j.xgen.2025.100983
A25080	JCM 5824T, JCM 5827T, JCM 9498T	Acetylated cellulose suppresses body mass gain through gut commensals consuming host-accessible carbohydrates.	Takeuchi T, Miyauchi E, Nakanishi Y, Ito Y, Kato T, Yaguchi K, Kawasumi M, Tachibana N, Ito A, Shimamoto S, Matsuyama A, Sasaki N, Kimura I, Ohno H	Cell Metab	37	1682-1697e6	2025	40381616	10.1016/j.cmet.2025.04.013
A25081	JCM 5826T, JCM 5827T, JCM 13471T	Microbiota-derived lysophosphatidylcholine alleviates Alzheimer’s disease pathology via suppressing ferroptosis.	Zha X, Liu X, Wei M, Huang H, Cao J, Liu S, Bian X, Zhang Y, Xiao F, Xie Y, Wang W, Zhang C	Cell Metab	37	169-186e9	2025	39510074	10.1016/j.cmet.2024.10.006
A25082	JCM 10478T, JCM 14663T	A type IV pili-mediated mutualism between two co-resident temperate archaeal viruses and their host.	Xiang J, Sonani R R, Wang Y, Chen Z, Xiong W, Chen J, Li S, An K, Wang Y, Liu Y, Kreutzberger M A B, Krupovic M, Egelman E H, Du S, Chen X	Cell Rep	44	115873	2025	40544455	10.1016/j.celrep.2025.115873
A25083	JCM 15078T	The direct and indirect inhibition of proinflammatory adipose tissue macrophages by acarbose in diet-induced obesity.	Li X, Zheng S, Xu H, Zhang Z, Han X, Wei Y, Jin H, Du X, Xu H, Li M, Zhang Z, Wang S, Sun G, Zhang D	Cell Rep Med	6	101883	2025	39742869	10.1016/j.xcrm.2024.101883
A25084	JCM 20135, JCM 31522T	Ferrocene-redox polymer interface enhances extracellular electron transfer in electroactive and non-electroactive bacteria via divergent mechanisms.	Gu S, Ueki A, Harada S, Mizuguchi K, Azhari S, Nagamine K, Miyake T, Méhes G	Chem Eng J	524	168913	2025		10.1016/j.cej.2025.168913
A25085	JCM 3225T	Identification of Two Distinct Stereoselective Lysine 5-Hydroxylases by Genome Mining Based on Alazopeptin Biosynthetic Enzymes.	Kawai S, Moriga K, Nirdnoy W, Hara R, Ogawa J, Katsuyama Y, Ohnishi Y	Chem Eur J	31	e202404790	2025	39960436	10.1002/chem.202404790
A25086	JCM 4913T	Iterative glycosylation on a single residue of a mature lasso peptide.	Sun K, Cui J-J, Zhai WK, Su X, Liu Y-C, Ning L, Xiong J, Gao K, Luo S, Lei X, Dong S-H	Chem Sci	16	6480-6487	2025	40103722	10.1039/D5SC00605H
A25087	JCM 25330T	Gut microbiota–mediated lipid accumulation as a driver of evolutionary adaptation to blue light toxicity in Drosophila.	Takada Y, Ichinose T, Fuse N, Saito K, Ikeda-Ohtsubo W, Tanimoto H, Hori M	Commun Biol	8	998	2025	40624279	10.1038/s42003-025-08348-6
A25088	JCM 11286T, JCM 19890T, JCM 32674T	Mechanism of soil bacteria (Cupriavidus sp. LA-1) for degrading natural pterin and lumazine pigments.	Doi Y, Maeda N, Takaya N	Commun Biol	8	1292	2025	40866499	10.1038/s42003-025-08737-x
A25089	JCM 19189T	Investigations into the biosynthesis of stieleriacines and related N-acyl tyrosines by comparative genomics, knock-out studies and total synthesis of epi-stieleriacine C.	Sauer M, Staack M, Balluff S, Jogler C, Kallscheuer N, Beemelmanns C	Commun Chem	8	283	2025	41023487	10.1038/s42004-025-01654-4
A25090	JCM 1192T, JCM 11019T	Modulation of Bifidobacterium by HD5 during weaning is associated with high abundance in later life.	Shimizu Y, Yokoi Y, Ohira S, Izumi H, Kawakami S, Ihara M, Tabata F, Takeda Y, Kimura T, Nakamura K, Tamakoshi A, Ayabe T, Nakamura K	Commun Med	5	250	2025	40595013	10.1038/s43856-025-00977-6
C25091	JCM 37069T	Erwinia aeris sp. nov., A Novel Bacterium Isolated from the Surface of an Ore in Hubei Province, China.	Guo H-B, Zhu H-T, Zhang Y-F, Yang F, Ma X-T, Li S-G, Wei H-L, Zhang X-X	Curr Microbiol	82	123	2025	39918747	10.1007/s00284-025-04090-8
A25092	JCM 2836T, JCM 15441T, JCM 34719T	Chitinophaga defluvii sp. nov., a Cyhalofop-Butyl-Degrading Bacterium Isolated from Municipal Sludge.	Liu X, Liang H, Zhu Y, Zhou Q, Shao S, Song M, Zhang H, Wu X, Zhang L	Curr Microbiol	82	124	2025	39920328	10.1007/s00284-025-04100-9
B25093	JCM 31169T, JCM 35896T	Comamonas squillarum sp. nov., Isolated from Intestine of Red Swamp Crayfish (Procambarus clarkii).	Shi S, Zhang D-F, Wang H-C, Jiang F-H, Cui L-F, Huang Y	Curr Microbiol	82	131	2025	39928163	10.1007/s00284-025-04093-5
C25094	JCM 36753T	Ornithinibacillus xuwenensis sp. nov., A Novel Thermotolerant Bacterium Isolated from Mangrove Sediment.	Li M, Hu X, Ni Y, Ni T, Li F, Xue D	Curr Microbiol	82	141	2025	39964409	10.1007/s00284-025-04120-5
C25095	JCM 37000T	Enterococcus hailinensis sp. nov., Isolated from Traditional Chinese Pickle.	Wang T-Y, Wang H, Gu C T	Curr Microbiol	82	171	2025	40047913	10.1007/s00284-025-04143-y
C25096	JCM 35618T, JCM 35621T	Description of Cytobacillus Mangrovibacter sp. nov., and Cytobacillus Spartinae sp. nov., Isolated from Mangrove Sediment.	Shi H, Rao M P N, Chen Q-Q, Quadri S R, Li W-J, Liu G-H	Curr Microbiol	82	185	2025	40069467	10.1007/s00284-025-04161-w
C25097	JCM 37289T	Meridianimarinicoccus marinus sp. nov., Isolated from Tidal Flat.	Kang M-S, Yu J-Y, Kim H-S, Dong K, Srinivasan S, Lee S-S	Curr Microbiol	82	197	2025	40095045	10.1007/s00284-025-04159-4
C25098	JCM 34643T	Taklimakanibacter albus sp. nov., an Endophytic Bacterial Species Isolated from the Root of Paris polyphylla var. yunnanensis.	Tian J-Y, Zhang Z, Zhao Y, Zhi X-Y, Yang L-L	Curr Microbiol	82	217	2025	40146289	10.1007/s00284-025-04193-2
A25099	JCM 21181T	Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments.	Woo H, Chhetri G, Kim I, Park S, Lee H, Yook S, Seo T	Curr Microbiol	82	226	2025	40175599	10.1007/s00284-025-04209-x
C25100	JCM 34547T	Proposal of Paenibacillus kandeliae sp. nov, Isolataed from Leaf of Kandelia candel.	Zan C-S, Ma X, Chen X-H, Chen M-S, Tuo L	Curr Microbiol	82	250	2025	40252092	10.1007/s00284-025-04225-x
C25101	JCM 35226T	Frateuria hangzhouensis sp. nov. Isolated from Soil of Moso Bamboo Forest in Hangzhou, China.	Yang F, Yue J, Wang Q, Zha W, Zhou Y, Yuan J, Li L, Sun Q, Liu L	Curr Microbiol	82	263	2025	40293513	10.1007/s00284-025-04232-y
C25102	JCM 37058T	Terrimonas alba sp. nov., an Ochratoxin A-Degrading Strain Isolated from Lakeside Soil.	Xiong M, Wu H, Li J, Wan Y, Chen X, Liu B, He J	Curr Microbiol	82	269	2025	40307622	10.1007/s00284-025-04254-6
C25103	JCM 37229T	Isolation and Characterisation of Gracilimonas aurantiaca sp. nov., A Novel Bacterium Isolated from Tidal-Flat Sediment.	Jayan J N, Srinivasan S, Lee S-S	Curr Microbiol	82	277	2025	40323436	10.1007/s00284-025-04257-3
C25104	JCM 35044T	Consotaella aegiceratis sp. nov., a Novel Endophytic Bacterium Isolated from Root of Aegiceras corniculatum.	Luo Y, Zan C, Chen M, Liu F, Chen X, Zheng Z, Ma X, Tuo L	Curr Microbiol	82	309	2025	40423812	10.1007/s00284-025-04294-y
C25105	JCM 33181T	Proposal to Transfer Bacillus yapensis to the Genus Robertmurraya as Robertmurraya yapensis comb. nov.	Dong Z, Hou J, Quadri S R, Quach N T, Rao M P N, Wu Y	Curr Microbiol	82	312	2025	40434498	10.1007/s00284-025-04292-0
C25106	JCM 35324T	Moraxella marmotae sp. nov. Isolated from the Respiratory Tract of Marmota himalayana.	Liu J, Wang Y, Zhou J, Hou Q, Ma J, Pu D, Pu J, Wang F, Yang J, Lu S	Curr Microbiol	82	332	2025	40512382	10.1007/s00284-025-04307-w
A25107	JCM 16677T	Parerythrobacter aurantius sp. nov., a Member of the Family Erythrobacteraceae Isolated from a Coastal Breakwater Stone.	Liu Y, Pei T, Du J, Deng M-R, Zhu H	Curr Microbiol	82	350	2025	40586921	10.1007/s00284-025-04340-9
C25108	JCM 36998T	Lacticaseibacillus suihuaensis sp. nov., Isolated from Traditional Chinese Pickle.	Zhu X-Y, Li C Y, Wang H, Gu C T	Curr Microbiol	82	380	2025	40646386	10.1007/s00284-025-04366-z
A25109	JCM 4219T, JCM 16925T	Streptomyces gilvus sp. nov., Actinomycete Isolated from Cassava (Manihot esculenta Crantz) Rhizosphere Soil.	Tangjitjaroenkun J, Suriyachadkun C, Ngaemthao W, Chunhachart O, Tangchitcharoenkhul R	Curr Microbiol	82	398	2025	40690033	10.1007/s00284-025-04388-7
A25110	JCM 11736T, JCM 13508T	Aurantibrevibacter litoralis gen. nov. sp. nov. a Novel Member in the Family Flavobacteriaceae Isolated from Sediment of Tidal Flat Located in Ningbo, China.	Cao Y-F, He D-Y, Wang Y-R, Cao K, Li Y, Gao J-W, Wang X-C, Xu L, Sun C, Yu X-Y	Curr Microbiol	82	423	2025	40736672	10.1007/s00284-025-04415-7
C25111	JCM 36624T	Pseudomonas bambusae sp.nov., an Aniline Blue-Decolorizing Bacterium Isolated from Decaying Round Bamboo Culms.	He X-L, Wang J-Y, Liang J-J, Ren C-J, Guo X-Y, Ke W-J, Wu M, Liu H-Z, Jin M, Sun F-L, Han S-B	Curr Microbiol	82	454	2025	40810806	10.1007/s00284-025-04442-4
C25112	JCM 37723T	Taxonomic Characterization and Genome Analysis of Polaribacter gochangensis sp. nov., Isolated From a Tidal Clam Farm.	Kathiresan A, Kim H-S, Dong K, Srinivasan S, Lee S-S	Curr Microbiol	82	463	2025	40824465	10.1007/s00284-025-04433-5
C25113	JCM 35886T, JCM 35887T	Whole Genome Sequencing-Based Taxonomic Identification of Dulcitol-Positive Cronobacter dublinensis subsp. beijingensis subsp. nov. and Cronobacter dublinensis subsp. infanticibi subsp. nov. from Infant Cereals in China.	Gan X, Li M, Li F, Zhao J, Li H, Fanning S, Dong Y, Bai L	Curr Microbiol	82	477	2025	40856722	10.1007/s00284-025-04447-z
B25114	JCM 31185T, JCM 37107T	Furfurilactobacillus entadae sp. nov., Isolated from Bark of Entada phaseoloides.	Suzuki S, Okano K, Tamaki M, Tsujii Y, Endo A, Kajikawa A	Curr Microbiol	82	480	2025	40879831	10.1007/s00284-025-04450-4
B25115	JCM 21268T, JCM 21789T, JCM 36646T, JCM 36648T	Roseobacter algicola sp. nov. and Sulfitobacter rhodophyticola sp. nov., Isolated from Marine Red Algae.	Choi S H, Baek W, Kim J M, Choi B J, Bayburt H, Lee J K, Lee S C, Jeon C O	Curr Microbiol	82	502	2025	40956432	10.1007/s00284-025-04490-w
C25116	JCM 36371T	Agromyces aerolatus sp. nov., an Actinobacterium Isolated from Air of Manufacturing Shop in a Pharmaceutical Factory.	ong M-H, Zhang N, Shi S, He W, Zhang Y-Q, Teng Y, Fan Y-L, Zhang D-F	Curr Microbiol	82	520	2025	40986060	10.1007/s00284-025-04503-8
C25117	JCM 34166T	Description of Fulverythrobacter ferritrahens gen. nov., sp. nov., a Siderophore-Producing Bacterium Isolated from Poultry Manure Compost and Reclassification of Caenibius fulvus and Altererythrobacter segetis as Fulverythrobacter fulvus Comb. nov. and Croceibacterium segetis Comb. nov.	Lin S-Y, Hameed A, Lin T-Y, Young C-C	Curr Microbiol	82	536	2025	41026207	10.1007/s00284-025-04519-0
C25118	JCM 35962T, JCM 36649T	Description of Tateyamaria algicola sp. nov. and Tateyamaria rhodophyticola sp. nov., Isolated from Marine Algae.	Choi B J, Kim J M, Bayburt H, Choi D G, Choi S H, Jeon C O	Curr Microbiol	82	545	2025	41065807	10.1007/s00284-025-04537-y
C25119	JCM 37210T	Ammoniphilus soli sp. nov., Isolated from an Efficient Pymetrozine-Degrading Bacterial Community Derived from a Long-Term Continuous Cotton Field in Xinjiang.	Chai L, Kong D, Mulati M, Yi Y, Zhang Z, Zhang W	Curr Microbiol	83	30	2025	41251768	10.1007/s00284-025-04449-x
B25120	JCM 14544T, JCM 35387T	Phaeovulum Molybdatiresistens sp. nov., a Molybdate-resistant Bacterium Isolated from Eutrophic Pond Water.	Song J, Qiu Y, Ma K, Liu Y, Wang J, Liu Y, Song X, Wang K, Hu J, Mu W, Zhao Y, Liu A, Zhang R, Liu H	Curr Microbiol	83	58	2025	41364372	10.1007/s00284-025-04641-z
A25121	JCM 34792T	Psychrotolerant Erwinia psychrophila sp. nov. and Erwinia magellanica sp. nov. Isolated from Penguin Faeces.	Sedláček I, Holochová P, Sedlář K, Staňková E, Umair M, Šedo O, Vives J, Koublová V, Nováková D, Švec P	Curr Microbiol	83	93	2025	41428085	10.1007/s00284-025-04670-8
A25122	JCM 12997T	Pathogenic effects of Streptococcus oralis intestinal colonization on bladder health in mice.	Nakamura N, Iioka K, Morisaki H, Okahashi N, Kurosawa M, Fukamachi H, Matsui S, Funatsu T, Kuwata H, Itsumi M	Curr Res Microb Sci	8	100375	2025	40207138	10.1016/j.crmicr.2025.100375
C25123	JCM 37305T	Halomonas kashgarensis sp. nov., a Novel Species Isolated from the Rhizosphere Soil of Phragmites australis (Cav.) Trin. ex Steud in Kashgar County, Xinjiang, China.	Liang Z-P, Wang Y, Chen X-Y, Wang R, Xu Y, Dai J-P, Singh D, Zhang X-X	Diversity	17	98	2025		10.3390/d17020098
A25124	JCM 6384T, JCM 15430	Anti-Mycobacterium avium complex activities of streptcytosine analogs from a marine actinomycete as nucleoside antibiotics.	Oshima N, Yagi A, Yamazaki H, Uchida R	Drug Discov Ther	19	262-266	2025	40850776	10.5582/ddt.2025.01052
A25125	JCM 2466T	Comparing gene-targeting efficiency of Agrobacterium tumefaciens-mediated transformation and electroporation in the pathogenic fungus Trichosporon asahii JCM2466.	Matsumoto Y, Nakayama M, Shimizu Y, Koganesawa S, Kanai H, Hayashi W, Matsuo T, Yamada T, Sugita T	Drug Discov Ther	19	337-345	2025	41110966	10.5582/ddt.2025.01084
A25126	JCM 5824T, JCM 5827T, JCM 5828T, JCM 33894T	Human gut associated Bacteroides and Akkermansia bacteria exhibit immunostimulatory activity in the silkworm muscle contraction assay.	Tabuchi F, Kano C, Hirota T, Kanda T, Sekimizu K, Miyashita A	Drug Discov Ther	19	74-79	2025	40010721	10.5582/ddt.2025.01001
A25127	JCM 2013	Development of Phenotypic Microbial Sensing System by AI-Driven AC Nanopore Method.	Yamamoto T, Hayashida K, Hosoya S, Takeuchi H, Hara Y, Majima T, Kita K, Sekiya T	Electr Eng Jpn	218	69-76	2025		10.1002/eej.23524
A25128	JCM 5963T	Distribution of Iron Importers and Ecological Traits in Pseudomonas Species Highlights the Potential Role of Efe System in Plant-Related Environments.	Okumura K, Ogura K, Hashimoto W	Environ Microbiol	27	e70128	2025	40671251	10.1111/1462-2920.70128
A25129	JCM 1217T	Enzymatic lacto-N-biose elongation of human milk oligosaccharides with the GH136 lacto-N-biosidase LnbX engineered for improved transglycosylation.	Vuillemin M, Lengyel M, Muschiol J, Matwiejuk M, Zhang Y, Cannac N, Molnar-Gabor D, Meyer A S, Zeuner B	Enzyme Microb Technol	189	110660	2025	40328212	10.1016/j.enzmictec.2025.110660
A25130	JCM 7785T	Characterization of a family IV esterase from extremely halophilic archaeon Haloarcula japonica.	Kato H, Ambai S, Ikeda F, Abe K, Nakamura S, Yatsunami R	Extremophiles	29	7	2025	39625542	10.1007/s00792-024-01370-2
B25131	JCM 9908T, JCM 34145T, JCM 34310T, JCM 34311T	Halobellus marinus sp. nov., Halobellus ordinarius sp. nov., Halobaculum rarum sp. nov., and Halorarum halobium sp. nov., halophilic archaea isolated from marine solar salt and a saline lake.	Zhu L-R, Nwankwo C, Hou J, Cui H-L	Extremophiles	29	13	2025	39869143	10.1007/s00792-025-01379-1
A25132	JCM 1254, JCM 1471T	Milk and mucin glycans orchestrate a synthetic infant gut microbiota structure.	Berkhout M D, Ioannou A, Jayaprakash Y K, Plugge C M, Belzer C	FEMS Microbiol Ecol	101	069	2025	40560164	10.1093/femsec/fiaf069
A25133	JCM 1136T	Evaluation of Sensory Properties and Short-Chain Fatty Acid Production in Fermented Soymilk on Addition of Fructooligosaccharides and Raffinose Family of Oligosaccharides.	Saci M, Kumar S, Prakash O, Krishnan V, Vinayaka, Tomar G S, Mishra J, Arpitha S R, Kaushik P, Rana V S, Dahuja A	Fermentation	11	194	2025		10.3390/fermentation11040194
A25134	JCM 11441	Promising Live Vaccine Against Nocardiosis in Japanese Amberjack Seriola quinqueradiata.	Matsuura Y, Takano T, shimahara Y, Yoshino T, Sakai T, Matsuyama T	Fish Pathology	60	1-11	2025		10.3147/jsfp.60.1
A25135	JCM 23047, JCM 23061, JCM 23062, JCM 23063	Antioxidant production by the katsuobushi mold Aspergillus chevalieri revealed—using fermentation-mimicking solid cultures.	Ogawa S, Okada S, Ninomiya A	Fish Sci	91	987–997	2025		10.1007/s12562-025-01909-y
C25136	JCM 37592	Structural determination of the carotenoid glycoside ester produced by the marine bacterium Exiguobacterium sp. strain oki7 and its antioxidant and anti-inflammatory effects.	Takatani N, Maoka T, Aoike M, Nanao M, Sawabe T, Beppu F, Hosokawa M	Fish Sci	91	999–1011	2025		10.1007/s12562-025-01897-z
A25137	JCM 1109, JCM 1131T, JCM 1132T, JCM 1231T	Enhanced Extraction and Functional Characterization of Pectin and Pectic Oligosaccharide from Grapefruit Residue Using Sodium Oxalate-Assisted Pressurized CO2.	Pattarapisitporn A, Nagatoshi Y, Klangpetch W, Hamanaka D, Inoue N, Noma S	Food Bioprocess Technol	18	9594–9614	2025		10.1007/s11947-025-03967-7
A25138	JCM 5805T	Pulsed electric field assisted mixed bacteria to efficiently control biogenic amines in air-dried goose.	Zhou Y, Xu J, Fan X, Shi Z, Wang W, Huang M, Yao K, Yan H, Zhou C, Hu Y, Pan D	Food Biosci	64	105935	2025		10.1016/j.fbio.2025.105935
A25139	JCM 19296, JCM 19755T, JCM 19877	Identification of flexixanthin and its derivatives in Algoriphagus bacteria and evaluation of their antioxidant and anti-inflammatory effects.	Takatani N, Sato-Takabe Y, Aoike M, Sekine R, Maoka T, Sawabe T, Beppu F, Shindo K, Hosokawa M	Food Biosci	65	106015	2025		10.1016/j.fbio.2025.106015
A25140	JCM 5828T	Gut microbiota modulation by polysaccharide from Aloe gel: Potential prebiotic and targeted regulatory effects.	Sun Y, Zhang S, Nie S	Food Chem	497	147049	2025	41240848	10.1016/j.foodchem.2025.147049
A25141	JCM 1238T, JCM 1396T, JCM 1415T, JCM 1657T, JCM 1658T, JCM 1672T	Suppression of fecal phenol production by oral supplementation of sesamol: inhibition of tyrosine phenol-lyase by sesamol.	Oikawa D, Byun Z, Mikami B, Gotoh A, Katoh T, Ueno R, Nakajima A, Yamashita S, Ikeda-Ohtsubo W, Takahashi S, Waki T, Kikuchi K, Abe T, Katayama T, Nakayama T	Food Funct	16	3542-3552	2025	40230229	10.1039/D4FO04839C
A25142	JCM 17690	Reduction of viability, heat resistance, and biofilm formation and persistence of Bacillus cereus spores in beef stew broth by herb and spice extracts.	Kim G-J, Jin Y H, Mah J-H	Food Res Int	221	117606	2025	41185353	10.1016/j.foodres.2025.117606
A25143	JCM 1192T, JCM 1395	Evaluation of the Fermentation Characteristics of Prebiotic-Containing Granola and Short-Chain Fatty Acid Production in an In Vitro Gut Microbiota Model.	Sasaki H, Masutomi H, Kobayashi Y, Toyohara K, Imaizumi K, Nakayama Y, Ishihara K	Food Sci Nutr	13	e70252	2025	40342529	10.1002/fsn3.70252
A25144	JCM 1149T	Lactiplantibacillus plantarum OLL2712 Protects From the Intestinal Dysfunction in D-Galactose Induced Senescent Cells.	Watanabe-Yasuoka Y, Watanabe R, Gotou A, Nakajima-Adachi H, Hachimura S, Sashihara T	Food Sci Nutr	13	e71019	2025	41030836	10.1002/fsn3.71019
A25145	JCM 20190T	Carbon Dots from Dried German Chamomile Flower and Its Residual Biomass: Characteristics, Bioactivities, Cytotoxicity and Its Preservative Effect on the Refrigerated Precooked Baby Clam (Paphia undulata).	Bora B, Palamae S, Zhang B, Yin T, Kim J T, Rhim J-W, Benjakul S	Foods	14	3130	2025	40941246	10.3390/foods14173130
A25146	JCM 20135, JCM 32814T	Development of Fructooligosaccharide-Rich Sugarcane Juice by Enzymatic Method and Enhancement of Its Microbial Safety Using High-Pressure Processing.	Kaewsalud T, Liony J M, Tongdonyod S, Phongthai S, Klangpetch W	Foods	14	3417	2025	41097585	10.3390/foods14193417
A25147	JCM 1217T, JCM 1275T	Host Dietary Nutrients Shape GH32-Mediated Microbial Responses to Prebiotic Fructans: A Randomized Trial.	Takahashi H, Fujii T, Yamada C, Kondo N, Kuramitsu K, Funasaka K, Ohno E, Hirooka Y, Tochio T, Fujiki K	Foods	14	4090	2025	41376027	10.3390/foods14234090
A25148	JCM 2162, JCM 5888T, JCM 22060	Fermentation Process Evaluation of a Sustainable and Innovative Miso Made from Alternative Legumes.	Santos R, Parente B, Mota M, Raymundo A, Prista C	Foods	14	4131	2025	41376067	10.3390/foods14234131
C25149	JCM 36489T	Stenotrophomonas tuberculopleuritidis sp. nov., a novel pathogenic Stenotrophomonas species isolated from tuberculous pleurisy patient.	Yu Z, Xu B, Wang R	Front Cell Infect Microbiol	15	15	2025	40851804	10.3389/fcimb.2025.1629703
A25150	JCM 1134T, JCM 5705T, JCM 8353T	Mineralization, anti-demineralization, and antibacterial effects of novel Bioactive Universal Bond with calcium salt monomers on dental caries.	Altankhishig B, Matsuda Y, Rao Y, Saito T	Front Dent Med	6	1633158	2025	41030695	10.3389/fdmed.2025.1633158
A25151	JCM 17463T	From gut to joint: the protective impact of Eubacterium rectale on rheumatoid arthritis.	Liu X, Wu R, Fan Y, Qin K, Li B, Li X, Gao C, Wang C	Front Immunol	16	1607804	2025	40787457	10.3389/fimmu.2025.1607804
A25152	JCM 4020	Transcriptionally induced nucleoid-associated protein-like ccr1 in combined-culture serves as a global effector of Streptomyces secondary metabolism.	Lei Y, Onaka H, Asamizu S	Front Microbiol	15	1422977	2025	39070263	10.3389/fmicb.2024.1422977
C25153	JCM 39159T, JCM 39160T, JCM 39513T	Characterization of three novel Helicobacter species infecting stomachs of dogs and cats: Helicobacter gastrocanis sp. nov., Helicobacter gastrofelis sp. nov., and Helicobacter felistomachi sp. nov.	Rimbara E, Aoki S, Suzuki M, Kobayashi H, Nakagawa T, Goto-Koshino Y, Nomura S, Du W-Y, Matsui H, Mori S, Shibayama K, Kenri T, Ohno K	Front Microbiol	15	1459401	2025	39895936	10.3389/fmicb.2024.1459401
A25154	JCM 18757T	Transcriptomic and proteomic insights into feather keratin degradation by Fervidobacterium.	Javier-López R, Kielbasa M, Armengaud J, Birkeland NK	Front Microbiol	16	1509937	2025	40309105	10.3389/fmicb.2025.1509937
C25155	JCM 35793T	Isolated from Populus euphratica rhizosphere soil, and mining their metabolites.	Zhang J-X, Chen Y-H, Luo X, Zhang L-L, Luo X-X	Front Microbiol	16	1530786	2025	40046295	10.3389/fmicb.2025.1530786
A25156	JCM 11614T	Genomic insights into Kocuria: taxonomic revision and identification of five IAA-producing extremophiles.	Li C-J, Jiang Z-M, Zhi X-Y, Chen H-H, Yu L-Y, Li G-F, Zhang Y-Q	Front Microbiol	16	1547983	2025	40497056	10.3389/fmicb.2025.1547983
A25157	JCM 4251T, JCM 5063T	Excavation of resources of Streptomyces species in frozen soils of the Qinghai-Tibet Plateau based on RpfA protein of Streptomyces coelicolor.	Xie Y, Liu J, Ma J, Shi N, Zhang X	Front Microbiol	16	1557511	2025	40264977	10.3389/fmicb.2025.1557511
C25158	JCM 37379T, JCM 37380T, JCM 37381T	Multiple-omics analysis of three novel haloalkaliphilic species of Kocuria revealed that the phenolic acid-degrading abilities are ubiquitous in the genus.	Xu L, Sun R-Q, Zeng J-H, Wei H-M, Shen B, Sun J-Q	Front Microbiol	16	1626161	2025	40809046	10.3389/fmicb.2025.1626161
B25159	JCM 10833T, JCM 18882T, JCM 18892, JCM 18977, JCM 21823T, JCM 30192T, JCM 30216T	Molecular characterization of heavy metal-tolerant bacteria and their potential for bioremediation and plant growth promotion.	Abbas S, Zulfiqar S, Arshad M, Khalid N, Hussain A, Ahmed I	Front Microbiol	16	1644466	2025	40862156	10.3389/fmicb.2025.1644466
C25160	JCM 36319T	Erwinia wuhanensis sp. nov. isolated from human blood.	Zhang Y, Zhan Y, Yang J, Lu Z	Front Microbiol	16	1675452	2025	40980318	10.3389/fmicb.2025.1675452
A25161	JCM 6427	Acidipropionibacterium acidipropionici, a propionate-producing bacterium, contributes to GPR41 signaling and metabolic regulation in high-fat diet-induced obesity in mice.	Miyamoto J, Ando Y, Yamano M, Nishida A, Murakami K, Kimura I	Front Nutr	12	1542196	2025	40248033	10.3389/fnut.2025.1542196
A25162	JCM 13865T	Cyclodextran prevents Porphyromonas gulae and Porphyromonas gingivalis induced halitosis and cytokine secretion via direct inhibition of biofilm formation.	Toyooka M, Kaneki M, Ohira C, Nakamura Y, Yamamoto M, Fukuyama T	Front Oral Health	6	1713668	2025	41487702	10.3389/froh.2025.1713668
A25163	JCM 6377T	mlstverse-web: advancing real-time identification of mycobacteria from sputum using targeted sequencing NALC-Seq.	Matsumoto Y, Fukushima K, Zhang S, Fauzyah Y, Motooka D, Saito H, Yamauchi J, Nitta T, Nii T, Matsuki T, Tsujino K, Miki K, Kida H, Nakamura S	Funct Integr Genomics	25	105	2025	40397179	10.1007/s10142-025-01609-x
A25164	JCM 9873	Effects of the wavelength and irradiance level of short-wave blue light on mycelial growth and deoxynivalenol production in Gibberella zeae.	Shirai A, Hosono K, Tanaka A, Tabata A	Fungal Biol	129	101690	2025	41338747	10.1016/j.funbio.2025.101690
A25165	JCM 8525, JCM 8532T, JCM 11025T, JCM 11150T	The Involvement of Oral Pathogenic Bacteria, Fusobacterium nucleatum Subspecies animalis in the Pathogenesis of Human Esophageal Adenocarcinoma.	Kitano T, Okumura S, Matsumoto T, Tsunoda S, Nishigori T, Obama K, Hara E	Gastro Hep Advances	4	100660	2025	40486267	10.1016/j.gastha.2025.100660
A25166	JCM 13191T	Product Speculation from Carotenogenic Gene Cluster of Nonlabens spongiae Genome, and Identification of Myxol and Functional Analysis of Each Gene.	Nakazawa K, Mineo D, Harayama T, Yoshizawa S, Takaichi S, Sugiyama K	Genes	16	202	2025	40004531	10.3390/genes16020202
A25167	JCM 1649T	DNA cross-link repair deficiency enhances human cell sensitivity to colibactin-induced genotoxicity.	Kawanishi M, Tsubohira O, Ueshima A, Hisatomi Y, Oda Y, Sato M, Miyoshi N, Mutoh M, Ishikawa H, Wakabayashi K, Yagi T, Watanabe K	Genes Environ	47	15	2025	40983955	10.1186/s41021-025-00339-7
A25168	JCM 1022, JCM 2414T, JCM 5707T, JCM 5885, JCM 5888T	Characterization of bacterial glycolipids in Pediococcus pentosaceus for fermented soybean paste (miso) and Tetragenococcus halophilus for soy sauce, in comparison with those in Lactobacillus, Streptococcus and Staphylococcus species.	Iwamori M, Tanaka K	Glycoconj J	42	199-207	2025	40663266	10.1007/s10719-025-10190-1
C25169	JCM 17495	Metabolic modification of Sphingobium lignivorans SYK-6 for lignin valorization through the discovery of an unusual transcriptional repressor of lignin-derived dimer catabolism.	Kato R,Kuatsjah E, Fujita M, Bleem A C, Hishiyama S, Katahira R, Senda T, Beckham G T, Kamimura N, Masai E	Green Chem	27	1540-1555	2025		10.1039/d4gc05328a
A25170	JCM 1192T, JCM 1209, JCM 1210, JCM 1217T, JCM 1222T, JCM 1254, JCM 1255T, JCM 1272, JCM 1290T, JCM 3816, JCM 3817, JCM 3818, JCM 7002, JCM 7016, JCM 7019, JCM 7020, JCM 7052, JCM 7054, JCM 7056, JCM 11344	In vitro competition with Bifidobacterium strains impairs potentially pathogenic growth of Clostridium perfringens on 2′-fucosyllactose.	Nakajima A, Arzamasov A A, Sakanaka M, Murakami R, Kozakai T, Yoshida K, Katoh T, Ojima M N, Hirose J, Nagao S, Xiao J-Z, Odamaki T, Rodionov D A, Katayama T	Gut Microbes	17	2478306	2025	40102238	10.1080/19490976.2025.2478306
A25171	JCM 10556T	Raffinose-metabolizing bacteria impair radiation-associated hematopoietic recovery via the bile acid/FXR/NF-κB signaling pathway.	Jiao Y, Ren J, Xie S, Yuan N, Shen J, Yin H, Wang J, Guo H, Cao J, Wang X, Wu D, Zhou Z, Qi X	Gut Microbes	17	2488105	2025	40192235	10.1080/19490976.2025.2488105
A25172	JCM 5826T	Estrogen-related receptor alpha mitigates radiation-induced bowel injury through gut enrichment of Bacteroides vulgatus.	Shin S G, Lee J-Y, Choi J-W, Yoo J-H, Jeong I-C, Kim D-Y, Kim H S, Paik S, Song G-Y, Kim K-H, Kim J-M, Bae J-W, Jo E-K, Kim S	Gut Microbes	17	2541020	2025	40827662	10.1080/19490976.2025.2541020
A25173	JCM 1131T, JCM 1185T, JCM 12513T, JCM 15953T	Functional biomarkers for endometriosis targeting small RNAs in bacterial extracellular vesicles.	Muraoka A, Yokoi A, Yoshida K, Matsuzaki J, Inami E, Bayasula, Kitagawa M, Miyake N, Sonehara R, Nakamura T, Osuka S, Kajiyama H	Heliyon	11	e44099	2025		10.1016/j.heliyon.2025.e44099
A25174	JCM 1840T, JCM 1841T, JCM 3765, JCM 3766T, JCM 3770T, JCM 3774T, JCM 3775T, JCM 5296, JCM 5350, JCM 5353T, JCM 6882T, JCM 6883, JCM 8097, JCM 8115T, JCM 8202T, JCM 8208T, JCM 8547T, JCM 9279T, JCM 10020, JCM 10021, JCM 10049, JCM 10207T, JCM 10212T, JCM 10213T, JCM 10292T, JCM 10699T, JCM 10908T, JCM 11251T, JCM 11491T, JCM 11641T, JCM 15063T, JCM 16303, JCM 21900, JCM 24501	Whole-genome based phylogeny and comparative genomics of Sporidiobolales and related taxa of Basidiomycetes.	Kobayashi Y, Tanaka N, Matsutani M, Kurokawa Y, Aoki K, Ohkuma M, Manabe R-I, Takashima M	IMA Fungus	16	e141626	2025	40400710	10.3897/imafungus.16.141626
A25175	JCM 36892T, JCM 36899T, JCM 36915T, JCM 36917T	Yeast diversity in traditional fermented foods of ethnic minorities in China, with the descriptions of four new yeast species.	Hu S, Zhu Q-Y, Zhu H-Y, Liu J-Y, Shi Y, Qiu Y-J, Wen Z, Li A-H, Han P-J, Bai F-Y	IMA Fungus	16	e146163	2025	40678360	10.3897/imafungus.16.146163
A25176	JCM 13368T	Gut microbiome and metabolome characteristics of patients with cholesterol gallstones suggest the preventive potential of prebiotics.	Liu Y, Li H, Sun T, Sun G, Jiang B, Liu M, Wang Q, Li T, Cao J, Zhao L, Xiao F, Zhao F, Cui H	iMeta	4	e70000	2025	40027485	10.1002/imt2.70000
A25177	JCM 1717T, JCM 5670T	Gut microbiota-derived tryptophan metabolites improve total parenteral nutrition-associated infections by regulating Group 3 innate lymphoid cells.	Huang L, Wang P, Liu S, Deng G, Qi X, Sun G, Gao X, Zhang L, Zhang Y, Xiao Y, Gao T, Maitiabula G, Wang X	iMeta	4	e70007	2025	40236767	10.1002/imt2.70007
C25178	JCM 36073T	Verticiella alkaliphila sp. nov., An Alkaliphilic, Arsenic-Resistant Bacterium Isolated from the Gut of Lepidocephalichthys guntea.	Basak C, Ranjan V K, Mondal N, Sarkar J, Ghosh W, Chakraborty R	Indian J Microbiol	65	947-954	2025	40655345	10.1007/s12088-024-01287-6
A25179	JCM 5805T	Efficacy of Lactococcus lactis Strain Plasma in Patients with Mild COVID-19: A Multicenter, Double-Blinded, Randomized-Controlled Trial (PLATEAU Study).	Yamamoto K, Inoue T, Ikeda T, Sawai T, Nagayoshi Y, Hashiguchi K, Futsuki Y, Matsubara Y, Harada Y, Ashizawa N, Fukahori S, Iwanaga N, Takazono T, Kido T, Ishimoto H, Hosogaya N, Sakamoto N, Tashiro M, Tanaka T, Fukushima C, Jounai K, Tsuji R, Fujiwara D, Ota K, Kosai K, Furumoto A, Yanagihara K, Izumikawa K, Mukae H	Infect Dis Ther	14	2835-2851	2025	41138036	10.1007/s40121-025-01246-8
A25180	JCM 13865T	Oral treatment with catechin isolated from Japanese green tea significantly inhibits the growth of periodontal pathogen Porphyromonas gulae and ameliorates the gingivitis and halitosis caused by periodontal disease in cats and dogs.	Ohira C, Kaneki M, Shirao D, Kurauchi N, Fukuyama T	Int Immunopharmacol	146	113805	2025	39693953	10.1016/j.intimp.2024.113805
A25181	JCM 1112T	A postbiotic exopolysaccharide synergizes with Lactobacillus acidophilus to reduce intestinal inflammation in a mouse model of colitis.	Ma C, Zheng X, Zhang Q, Renaud S J, Yu H, Xu Y, Chen Y, Gong J, Cai Y, Hong Y, Li H, Liao Q, Guo Y, Kang L, Xie Z	Int J Biol Macromol	291	138931	2025	39732236	10.1016/j.ijbiomac.2024.138931
A25182	JCM 17883T	Role of Mms7 from Magnetococcus marinus MC-1 in controlling the growth and properties of biomimetic magnetic nanoparticles.	Jimenez-Carretero M, Pozo-Gualda T, Lázaro M, Sola-Leyva A, Rodriguez-Jimenez P A, Carrasco-Jiménez M P, Iglesias G R, Perduca M, Jimenez-Lopez C	Int J Biol Macromol	307	142165	2025	40101825	10.1016/j.ijbiomac.2025.142165
A25183	JCM 5824T, JCM 9498T	Structural analysis of (2 → 1)-β-d-fructofuranosides linked to a terminal difructose dianhydride III produced by Bacteroides endo-type inulin fructotransferase.	Ishiwata A, Shite Y, Kitahara K, Tanaka K, Ito Y, Fujita K	Int J Biol Macromol	310	143064	2025	40220837	10.1016/j.ijbiomac.2025.143064
A25184	JCM 5818T	Phage PL-1 endolysin and osmotic stress as tools to enhance heterologous protein display in lactic acid bacteria platforms.	Gordillo T B, Jastrebow I G, Rossi M C D, Lima C H D S, Bockor S S, Allievi M C, Porto D F D, Palomino M M	Int J Biol Macromol	320	145886	2025	40651636	10.1016/j.ijbiomac.2025.145886
A25185	JCM 10645T	Solobacterium moorei promotes tumor progression via the Integrin α2/β1-PI3K-AKT-mTOR-C-myc signaling pathway in colorectal cancer.	Chen Y, Qin Y, Fan T, Qiu C, Zhang Y, Dai M, Zhou Y, Sun Q, Guo Y, Hao Y, Jiang Y	Int J Biol Sci	21	1497-1512	2025	39990665	10.7150/ijbs.102742
A25186	JCM 6425T	Synthesis and Biological Assessment of Eucalyptin: Magic Methyl Effects.	Fuchiyama K, Yabuki Y, Yamamoto Y, Asakawa R, Matsumoto S, Ibayashi Y, Furuyama Y, Ohgane K, Kamisuki S, Watashi K, Matsubayashi M, Kuramochi K	Int J Mol Sci	26	3391	2025	40244279	10.3390/ijms26073391
A25187	JCM 2257T, JCM 5803T	Antimicrobial Activity of Carboxymethyl Cellulose Films Containing Plantaricin W and Enterocin F4-9 for Meat Preservation.	Maky M A, Sonomoto K, Zendo T	Int J Mol Sci	26	6083	2025	40649861	10.3390/ijms26136083
A25188	JCM 9103T, JCM 12172, JCM 14827T, JCM 19149T, JCM 31783T	Pseudonocardia spirodelae sp. nov., isolated from duckweed and formal proposal to reclassify Pseudonocardia antarctica as a later heterotypic synonym of Pseudonocardia alni and reclassify Pseudonocardia carboxydivorans as Pseudonocardia alni subsp. carboxydivorans.	Butdee W, Saimee Y, Suriyachadkun C, Duangmal K	Int J Syst Evol Microbiol	75	006608	2025	39750118	10.1099/ijsem.0.006608
C25189	JCM 34968T	Roseomonas cutis sp. nov., isolated from human epidermis.	Son H, Mun W, Mitchell R J, Cho G-S, Moon J-Y, Lee K	Int J Syst Evol Microbiol	75	006617	2025	39786838	10.1099/ijsem.0.006617
A25190	JCM 21370T	Tistrella arctica sp. nov., isolated from the surface seawater of the Bering Sea and Chukchi Sea and emended description of the genus Tistrella.	Zhang J, Wang J, Lai Q, Liu X, Li G, Pan P, He Z, Shao Z, Dong C	Int J Syst Evol Microbiol	75	006627	2025	39760644	10.1099/ijsem.0.006627
A25191	JCM 18446T	Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary.	Márton D, Farkas M, Bedics A, Tóth E, Táncsics A, Bóka K, Maróti G, Baka E, Kriszt B, Cserháti M	Int J Syst Evol Microbiol	75	006628	2025	39773772	10.1099/ijsem.0.006628
C25192	JCM 36615T	Scrofimicrobium appendicitidis sp. nov., isolated from a patient with ruptured appendicitis.	Lao H-Y, Wong A Y P, Ng T T-L, Wong R Y-L, Yau M C-Y, Lam J Y-W, Siu G K-H	Int J Syst Evol Microbiol	75	006633	2025	39836460	10.1099/ijsem.0.006633
C25193	JCM 36128T, JCM 36129T, JCM 36130T, JCM 36131T	Desulfovibrio falkowii sp. nov., Porphyromonas miyakawae sp. nov., Mediterraneibacter flintii sp. nov. and Owariibacterium komagatae gen. nov., sp. nov., isolated from human faeces.	Hamaguchi T, Ohara M, Hisatomi A, Sekiguchi K, Takeda J-I, Ueyama J, Ito M, Nishiwaki H, Ogi T, Hirayama M, Ohkuma M, Sakamoto M, Ohno K	Int J Syst Evol Microbiol	75	006636	2025	39804682	10.1099/ijsem.0.006636
A25194	JCM 2410T	Chryseobacterium salviniae sp. nov., a bacterium isolated from the roots of the aquatic plant Salvinia minima.	Sparks K, Guy N, Lengyel G, Franks J, Maltman C	Int J Syst Evol Microbiol	75	006644	2025	39812644	10.1099/ijsem.0.006644
C25195	JCM 39521T	Desulfosporosinus paludis sp. nov., an acidotolerant sulphate-reducing bacterium isolated from moderately acidic fen soil.	Dyksma S, Neumann-Schaal M, Müsken M, Pester M	Int J Syst Evol Microbiol	75	006648	2025	39869511	10.1099/ijsem.0.006648
B25196	JCM 18524T, JCM 35081T	Lentilactobacillus terminaliae sp. nov., isolated from tree bark (Terminalia ivorensis Chev.) and its antioxidant activity.	Phuengjayaem S, Kingkaew E, Chamroensaksri N, Phongsopitanun W, Tanasupawat S	Int J Syst Evol Microbiol	75	006649	2025	39869507	10.1099/ijsem.0.006649
C25197	JCM 35478T, JCM 35614T, JCM 35615T, JCM 35616T, JCM 35619T, JCM 35620T	Description of six novel species Bacillus bruguierae sp. nov., Bacillus kandeliae sp. nov., Bacillus yunxiaonensis sp. nov., Metabacillus rhizosphaerae sp. nov., Metabacillus sediminis sp. nov. and Psychrobacillus mangrovi sp. nov., isolated from mangrove ecosystem.	Liu G-H, Rao M P N, Shi H, Chen Q-Q, Quadri S R, Li W-J	Int J Syst Evol Microbiol	75	006656	2025	39874073	10.1099/ijsem.0.006656
C25198	JCM 36741T, JCM 36742, JCM 36748	Discovery and identification of a novel yeast species, Hanseniaspora drosophilae sp. nov., from Drosophila in Okinawa, Japan.	Seike T, Takekata H, Kono K, Sakata N, Kotani H, Furusawa C, Matsuda F	Int J Syst Evol Microbiol	75	006661	2025	39903503	10.1099/ijsem.0.006661
C25199	JCM 36598T, JCM 36599	Thalassobellus suaedae gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae isolated from a halophyte Suaeda japonica.	Lee S Y, Rho A, Choi J Y, Choi J, Lee B M, Cho B C, Hwang C Y	Int J Syst Evol Microbiol	75	006663	2025	39937673	10.1099/ijsem.0.006663
C25200	JCM 39345	Stachybotrys qujingensis sp. nov., a new hyphomycete from desertified rocky soil in southwest China.	Dai X-W, Ren Z-Y, Pan X-R, Yu Z-F	Int J Syst Evol Microbiol	75	006664	2025	39882967	10.1099/ijsem.0.006664
C25201	JCM 35999T	Comamonas halotolerans sp. nov., isolated from the faecal sample of a zoo animal, Naemorhedus caudatus.	Park Y, Kim B, Min J, Park W	Int J Syst Evol Microbiol	75	006665	2025	39878779	10.1099/ijsem.0.006665
C25202	JCM 39522T	Minisyncoccus archaeiphilus gen. nov., sp. nov., a mesophilic, obligate parasitic bacterium and proposal of Minisyncoccaceae fam. nov., Minisyncoccales ord. nov., Minisyncoccia class. nov. and Minisyncoccota phyl. nov. formerly referred to as Candidatus Patescibacteria or candidate phyla radiation.	Nakajima M, Nakai R, Hirakata Y, Kubota K, Satoh H, Nobu M K, Narihiro T, Kuroda K	Int J Syst Evol Microbiol	75	006668	2025	39928396	10.1099/ijsem.0.006668
A25203	JCM 14021T	Tamlana flava sp. nov., isolated from mangrove sediment and genome-based taxonomic analysis of the genus Tamlana.	Huang Z, Lai Q, Dai C	Int J Syst Evol Microbiol	75	006673	2025	39918856	10.1099/ijsem.0.006673
C25204	JCM 36703T	Fulvimarina uroteuthidis sp. nov., isolated from a marine invertebrate and Uroteuthis (Photololigo) edulis.	Moon Y-L, Kim K H, Park J-S	Int J Syst Evol Microbiol	75	006683	2025	40048592	10.1099/ijsem.0.006683
A25205	JCM 18896T	Isolation and characterization of Novosphingobium aquae sp. nov. and Novosphingobium anseongense sp. nov., isolated from freshwater.	Hong J-Y, Jo J-H, Chun S-Y, Im W-T	Int J Syst Evol Microbiol	75	006688	2025	40009431	10.1099/ijsem.0.006688
C25206	JCM 33914, JCM 34493T	Antrihabitans spumae sp. nov., a novel bacterium isolated from stable foams formed in wastewater treatment plants and emended description of the genus Antrihabitans.	Suescún-Sepúlveda J A, Riesco R, Petrovski S, Soddell J, Sangal V, Jones A L, Sánchez-Juanes F, Seviour R J, Goodfellow M, Trujillo M E	Int J Syst Evol Microbiol	75	006695	2025	40018865	10.1099/ijsem.0.006695
B25207	JCM 2523T, JCM 17803T, JCM 21496T, JCM 36176T, JCM 36178T, JCM 36465T, JCM 36482T	Curvibacter soli sp. nov., Extensimonas soli sp. nov., Pseudarthrobacter naphthalenicus sp. nov. and Terripilifer ovatus gen. nov., sp. nov., four new species isolated from polluted soil.	Liu Z-S, Wang K-H, Wang X-K, Cai M, Yang M-L, Yang W-K, Li D-F, Liu S-J	Int J Syst Evol Microbiol	75	006698	2025	40048583	10.1099/ijsem.0.006698
C25208	JCM 36890T	Ascoidea xinghuacunensis sp. nov., a novel ascomycetous yeast species from Xinghuacun Fenjiu old workshop, Shanxi province of China.	Zhen P, Zhu H-Y, Han Y, Luo L-J, Guo L-C, Hu S, Wei Y-H, Wen Z, Han D-Y, Lin Z-W, Bai F-Y, Han P-J	Int J Syst Evol Microbiol	75	006700	2025	40029285	10.1099/ijsem.0.006700
C25209	JCM 24555	Rhodotorula tropicalis sp. nov., a novel red yeast of the order Sporidiobolales isolated from Thailand, Indonesia and Japan.	Khunnamwong P, Nualthaisong P, Kingphadung K, Takashima M, Sugita T, Sumerta I N, Kanti A, Kawasaki H, Limtong S	Int J Syst Evol Microbiol	75	006701	2025	40062422	10.1099/ijsem.0.006701
C25210	JCM 37145T	Sulfitobacter sediminis sp. nov., a novel halophilic bacterium isolated from tidal flat sediment.	Jayan J N, Dong K, Srinivasan S, Lee S-S	Int J Syst Evol Microbiol	75	006705	2025	40072908	10.1099/ijsem.0.006705
A25211	JCM 1275T, JCM 19861	Reclassification of Bifidobacterium faecale Choi et al. 2014 as a later heterotypic synonym of Bifidobacterium adolescentis Reuter 1963.	Okuhama S, Takahashi H, Nakayama Y, Endo A	Int J Syst Evol Microbiol	75	006706	2025	40085487	10.1099/ijsem.0.006706
C25212	JCM 36670T	Paenibacillus campi sp. nov., a novel endophytic bacterium isolated from Pennisetum species.	Yao L, Rao M P N, Xie C-J, Gao P, Zhang S-Q, Liu G-H, Zhou S-G	Int J Syst Evol Microbiol	75	006708	2025	40067349	10.1099/ijsem.0.006708
C25213	JCM 39153T	Ureaplasma ceti sp. nov. isolated from the gastric fluid of a spotted dolphin (Stenella attenuata).	Segawa T, Nakajima Y, Yamamoto K, Kishima S, Itou T	Int J Syst Evol Microbiol	75	006712	2025	40067348	10.1099/ijsem.0.006712
C25214	JCM 36585T, JCM 36586	Description of Qipengyuania profunda sp. nov., isolated from deep seawater of the Amundsen Sea (Antarctica), and reclassification of Qipengyuania aerophila Liu et al. 2022 as a later heterotypic synonym of Qipengyuania pacifica Tareen et al. 2022.	Lee B M, Choi J Y, Lee S Y, Rho A, Yun S, Lee W S, Cho B C, Hwang C Y	Int J Syst Evol Microbiol	75	006713	2025	40095852	10.1099/ijsem.0.006713
C25215	JCM 36737T, JCM 37293T	Streptomyces solicamelliae sp. nov. and Streptomyces solicathayae sp. nov., isolated from the rhizosphere soil of Camellia oleifera and Cathaya argyrophylla.	Zheng Y, Tang T, Mo P, Wu Z, Li K, Zou W, Wang Y, Li B	Int J Syst Evol Microbiol	75	006714	2025	40100705	10.1099/ijsem.0.006714
A25216	JCM 31396T, JCM 36480T, JCM 36481T	Microbacterium candidum sp. nov. and Microbacterium capsulatum sp. nov., isolated from waste landfill.	Wen W, Zhao Y, Xie B, Lv J	Int J Syst Evol Microbiol	75	006715	2025	40063666	10.1099/ijsem.0.006715
C25217	JCM 37022T	Kitasatospora camelliae sp. nov., isolated from rhizosphere soil of Camellia oleifera.	Li K, Qian Y, Gao J, Liang W	Int J Syst Evol Microbiol	75	006717	2025	40100696	10.1099/ijsem.0.006717
A25218	JCM 17997T, JCM 18391T	Vallitalea sediminicola sp. nov. and Vallitalea maricola sp. nov., anaerobic bacteria isolated from deep-marine sediment.	Hirano S, Maeda A, Terahara T, Mori K, Hamada M, Miura T, Matsumoto R, Kobayashi T	Int J Syst Evol Microbiol	75	006721	2025	40184183	10.1099/ijsem.0.006721
A25219	JCM 13317T	Brevibacterium koreense sp. nov., a moderately halophilic bacterium isolated from jogae-jeotgal, a Korean fermented seafood.	Nam S, Kim Y, Lee M J, Kim Y B, Yun J U, Jung M-J, Song H S, Lee S H, Kim S-J, Whon T W	Int J Syst Evol Microbiol	75	006722	2025	40146786	10.1099/ijsem.0.006722
A25220	JCM 33879T	Flavobacterium anseongense sp. nov. and Flavobacterium wongokense sp. nov., isolated from freshwater and freshwater soil in South Korea.	Jo J-H, Lee S-Y, Chun S-Y, Im W-T	Int J Syst Evol Microbiol	75	006724	2025	40232954	10.1099/ijsem.0.006724
C25221	JCM 37202T, JCM 37203T	Roseovarius conchicola sp. nov. and Aliiroseovarius conchicola sp. nov., isolated from the marine conch Reishia bronni.	Ha S H, Lee M S, Park M-J, Kwon K K, Park J-S	Int J Syst Evol Microbiol	75	006725	2025	40117186	10.1099/ijsem.0.006725
C25222	JCM 37231T	Psychrobacter saeujeotis sp. nov., a novel halophilic bacterium isolated from salted shrimp jeotgal.	Kim E, Cai Y, Yang S-M, Lee W, Kim H-Y	Int J Syst Evol Microbiol	75	006734	2025	40131329	10.1099/ijsem.0.006734
C25223	JCM 36630T	Marivivens marinum sp. nov., isolated from tidal flat, Gochang, South Korea.	Kang M-S, Kim H-S, Yu J-Y, Srinivasan S, Lee S-S	Int J Syst Evol Microbiol	75	006735	2025	40127120	10.1099/ijsem.0.006735
B25224	JCM 14667T, JCM 35916T	Nocardia arseniciresistens sp. nov., isolated from lead–zinc mine tailing.	Wang X-M, Chen X, Zhu G-X, Lu C-M, Yang Y-C, Zhang J, Dong H-T, Xu S-G, Liang L-M, Tang S-K, Cao Y-R	Int J Syst Evol Microbiol	75	006738	2025	40193177	10.1099/ijsem.0.006738
A25225	JCM 19688	Description of Pseudomonas gorinensis sp. nov., a plant growth-promoting bacterium that modulates stomatal aperture.	Gonzalez M E, Castagno L N, Sannazzaro A I, Rios C, Gudesblat G E, Altabe S G, Bedoya-Castañeda D C, Estrella M J, Pieckenstain F L	Int J Syst Evol Microbiol	75	006739	2025	40162554	10.1099/ijsem.0.006739
C25226	JCM 31119T	Marinicellulosiphila megalodicopiae gen. nov., sp. nov., a deep-sea alkaliphilic cellulolytic bacterium isolated from an endemic ascidian Megalodicopia hians.	Tachioka M, Miyazaki M, Tsudome M, Tsuda M, Uchimura K, Takaki Y, Deguchi S	Int J Syst Evol Microbiol	75	006742	2025	40177724	10.1099/ijsem.0.006742
C25227	JCM 37205T	Nocardioides eburneus sp. nov., isolated from commercial soil.	Kang M-S, Yu J-Y, Kim Y H, Dong K, Srinivasan S, Lee S-S	Int J Syst Evol Microbiol	75	006743	2025	40237765	10.1099/ijsem.0.006743
A25228	JCM 1413T, JCM 6289T	Inconstantimicrobium mannanitabidum sp. nov., a novel member of the family Clostridiaceae isolated from anoxic soil under the treatment of reductive soil disinfestation.	Ueki A, Tonouchi A, Honma S, Kaku N, Ueki K	Int J Syst Evol Microbiol	75	006748	2025	40215097	10.1099/ijsem.0.006748
A25229	JCM 13645T	Proposal of Paraglaciecola agarilytica (Yong et al. 2007) Shivaji and Reddy 2014 as a later heterotypic synonym of Paraglaciecola chathamensis (Matsuyama et al. 2006) Shivaji and Reddy 2014 and an emended description of Paraglaciecola chathamensis.	Zou W, Tang T, Ming Y, Liu J, Zheng Y, Li K, Mo P, Li B	Int J Syst Evol Microbiol	75	006758	2025	40266680	10.1099/ijsem.0.006758
B25230	JCM 10248T, JCM 34552T	Micropruina sonneratiae sp. nov., a novel endophytic actinobacterium isolated from bark of Sonneratia apetala and emended description of the genus Micropruina.	Yi H-B, Chen M-S, Chen X-H, Zheng Z-Q, Ma X, Tuo L	Int J Syst Evol Microbiol	75	006759	2025	40266890	10.1099/ijsem.0.006759
C25231	JCM 37420T, JCM 37421T	Georgenia wangjunii sp. nov. and Georgenia sunbinii sp. nov. isolated from the faeces of Cygnus atratus in the Qinghai-Tibet Plateau of China.	Ma J, Hou Q, Zhou H, Yang J, Yang C, Liu J, Wang Y, Cao L, Pu J, Wang W, Jin D, Lu S, Xu J	Int J Syst Evol Microbiol	75	006762	2025	40522818	10.1099/ijsem.0.006762
C25232	JCM 37054T	Rodentibacter abscessus sp. nov. isolated from pet hamster subcutaneous abscess.	Nakahara T, Nakamura A, Tamai K, Komatsu M, Ohkusu K	Int J Syst Evol Microbiol	75	006766	2025	40272875	10.1099/ijsem.0.006766
C25233	JCM 36076T	Janthinobacterium aestuarii sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA.	Pavloudi C, Shlafstein M D, Flor Y T D L, Smith E M, Peñuela A C, Papke E, Oliver L, Slattery K, Lissner G, Coelho L C, Oline D K, Videau P, Strangman W K, Ushijima B, Saw J H	Int J Syst Evol Microbiol	75	006768	2025	40313181	10.1099/ijsem.0.006768
A25234	JCM 18551T, JCM 18554T, JCM 18555T	Genomic-based taxonomic classification of the order Sphingomonadales.	Wang Y, You H, Kong Y-H, Sun C, Wu L-H, Kim S-G, Lee J-S, Xu L, Xu X-W	Int J Syst Evol Microbiol	75	006769	2025	40372931	10.1099/ijsem.0.006769
C25235	JCM 39108T	Microaceticoccus formicicus gen. nov., sp. nov., an ammonia-tolerant formate-utilizing bacterium originating from a biogas process.	Cheng G, Schnürer A, Westerholm M	Int J Syst Evol Microbiol	75	006773	2025	40338641	10.1099/ijsem.0.006773
C25236	JCM 35902T	Identification of Roseomonas xinghualingensis sp. nov. isolated from hospital air.	Kang Z, Lei W, Pu J, Zhao L, Min G, Liu Y, Chang W, Gao Y, Dong K, Sun B	Int J Syst Evol Microbiol	75	006775	2025	40338647	10.1099/ijsem.0.006775
A25237	JCM 6044T	Nocardia sichangensis sp. nov., isolated from rocky soil of Sichang Island.	Sripreechasak P, Kanchanasin P, Suriyachadkun C, Supong K, Tanasupawat S, Phongsopitanun W	Int J Syst Evol Microbiol	75	006784	2025	40388326	10.1099/ijsem.0.006784
C25238	JCM 36418T, JCM 36736T	Streptomyces lycopersici sp. nov. and Streptomyces cucumeris sp. nov., two novel actinobacteria isolated from rhizosphere soil with broad-spectrum antifungal activity.	Qi S, Qin Y, Yang X, Song W, Zhang H, Ju H, Wang X, Zhao J, Xiang W	Int J Syst Evol Microbiol	75	006785	2025	40354191	10.1099/ijsem.0.006785
C25239	JCM 37009T	Description of Humidisolicoccus flavus gen. nov., sp. nov., a novel actinobacterium isolated from riverside soil.	Kim D C, Kim S B	Int J Syst Evol Microbiol	75	006786	2025	40397506	10.1099/ijsem.0.006786
C25240	JCM 36914T	Torulaspora lindneri sp. nov., a novel ascomycetous yeast species isolated from China and Thailand.	Hu S, Jindamorakot S, Zhu Q-Y, Guo L-C, Am-In S, Sawaengkaew J, Tigu F, Han P-J, Bai F-Y	Int J Syst Evol Microbiol	75	006789	2025	40378063	10.1099/ijsem.0.006789
C25241	JCM 37126T, JCM 37131T, JCM 37141T	Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers.	Zhao C, Xin Y-H, Liu Q	Int J Syst Evol Microbiol	75	006799	2025	40478233	10.1099/ijsem.0.006799
C25242	JCM 36072T	Gaoshiqia hydrogeniformans sp. nov., a novel hydrogen-producing bacterium isolated from a deep diatomaceous shale formation.	Ueno A, Sato K, Tamamura S, Murakami T, Inomata H, Tamazawa S, Amano Y, Miyakawa K, Naganuma T, Igarashi T	Int J Syst Evol Microbiol	75	006802	2025	40465470	10.1099/ijsem.0.006802
B25243	JCM 5706T, JCM 11056T, JCM 16647T, JCM 17100T, JCM 31965T, JCM 32106T, JCM 33485T, JCM 33486T, JCM 34431T, JCM 34432, JCM 36015T	Genome-based reclassification of the genus Lactococcus and two novel species Pseudolactococcus yaeyamensis gen. nov., sp. nov. and Lactovum odontotermitis sp. nov. isolated from the gut of termites.	Abe K, Yuki M, Imagawa Y, Hisatomi A, Ohkuma M, Sakamoto M, Noda S	Int J Syst Evol Microbiol	75	006803	2025	40471659	10.1099/ijsem.0.006803
C25244	JCM 39552T	Faecalibacterium langellae sp. nov. isolated from human faeces.	Xuan A A L, Robert V, Hisatomi A, Hirasaki M, Maeno S, Ohkuma M, Sakamoto M, Chatel J-M, Endo A	Int J Syst Evol Microbiol	75	006804	2025	40459242	10.1099/ijsem.0.006804
C25245	JCM 35325T, JCM 35326T, JCM 35327T, JCM 37397T	Characterization of four novel members of genus Streptococcus from wild animals: description of Streptococcus handemini sp. nov., Streptococcus jiangjianxini sp. nov., Streptococcus tangpeifui sp. nov. and Streptococcus huangxiaojuni sp. nov.	Pu D, Zhou J, Hou Q, Zhou H, Yang J, Pu J, Ma J, Luo W, Liu J, Jin D, Lu S, Zheng H, Xu J	Int J Syst Evol Microbiol	75	006814	2025	40627438	10.1099/ijsem.0.006814
B25246	JCM 12514T, JCM 16170T, JCM 19617T, JCM 30911T, JCM 37001T, JCM 37150T	Lacticaseibacillus salsurae sp. nov. and Levilactobacillus muriae sp. nov., isolated from traditional Chinese pickle.	Song S-T, Wang T-Y, Zhu X-Y, Gu C T	Int J Syst Evol Microbiol	75	006816	2025	40536504	10.1099/ijsem.0.006816
C25247	JCM 35939T	Arcobacter iocasae sp. nov., a bacterium isolated from the gill homogenate of the mussel Gigantidas platifrons in a cold seep.	Zhang H, Jin S, Wang H, Li F, Zhong Z, Guo Y, Luo J, Ye Z, Lian C, Wang M, Li C	Int J Syst Evol Microbiol	75	006818	2025	40536799	10.1099/ijsem.0.006818
C25248	JCM 36203T, JCM 36205T	Microbacterium jiangjiandongii sp. nov. and Microbacterium wangruii sp. nov., two β-cryptoxanthin-producing bacteria isolated from intestinal contents of Marmota himalayana.	Ye L, Liu X, Yang J, Pu J, Yang C, Zhang G, Zhou J, Liu Y, Jin D, Lu S, Xu J	Int J Syst Evol Microbiol	75	006821	2025	40540410	10.1099/ijsem.0.006821
C25249	JCM 36658T	Oceaniferula spumae sp. nov., a novel Verrucomicrobiota bacterium, isolated from sea foam at Noto Peninsula, Ishikawa, Japan.	Huang C, Jiang C, Sato-Takabe Y, Makabe-Kobayashi Y, Tsukamoto Y, Yoshizawa S, Hamasaki K	Int J Syst Evol Microbiol	75	006828	2025	40621810	10.1099/ijsem.0.006828
C25250	JCM 37383T	Dellaglioa kimchii sp. nov., a novel lactic acid bacterium isolated from kimchi.	Ko H I, Kim S-R, Jeong C-R, Yun M, Nam S, Eun J-B, Kim T-W	Int J Syst Evol Microbiol	75	006829	2025	40587182	10.1099/ijsem.0.006829
C25251	JCM 37021T	Nocardiopsis protaetiae sp. nov., a novel actinobacterium isolated from the frass of Protaetia brevitarsis larvae.	Liu Y, Zhang L, Yang X, Xiao J, Ju H, Li C, Shu C, Wang X, Zhao J, Xiang W	Int J Syst Evol Microbiol	75	006832	2025	40600246	10.1099/ijsem.0.006832
C25252	JCM 37534T	Corynebacterium rhinophilum sp. nov. isolated from the human upper respiratory tract.	Popowitch E B, Boiditswe S C, Patel M Z, Aquino J N, Hurst J H, Steenhoff A P, Cunningham A L, Yoon J W, Seed P C, Kelly M S	Int J Syst Evol Microbiol	75	006835	2025	40643564	10.1099/ijsem.0.006835
C25253	JCM 36980T	Rhodotorula silvicola sp. nov., a new yeast species from plant-associated substrates and mushroom.	Wei Y-H, Guo L-C, Zhu H-Y, Wen Z, Yao S-J, You X-L, Fan E-D, Boundy-Mills K, Sitepu I, Bai F-Y, Wang D-Q, Han P-J	Int J Syst Evol Microbiol	75	006836	2025	40643100	10.1099/ijsem.0.006836
C25254	JCM 37746T	Brachymonas wangyanguii sp. nov., isolated from the coal samples in Shanxi Province of China.	Gao F, Zhang M, Yang Q, Zhao L, Xie J, Yang C, Du X, Kang Z, Pu J, Zheng H, Xu J, Dong K	Int J Syst Evol Microbiol	75	006837	2025	40632584	10.1099/ijsem.0.006837
C25255	JCM 39528	Methanosuratincola petrocarbonis gen. nov., sp. nov., a methyl-reducing methanogen isolated from Shengli oil field, and proposal of Methanosuratincolaceae fam. nov., Methanosuratincolales ord. nov. and Methanosuratincolia classis nov. in the phylum Thermoproteota.	Wu K, Zhou L, Zheng F, Liu L, Yang M, Li J, Sousa D Z, Cheng L	Int J Syst Evol Microbiol	75	006839	2025	40637718	10.1099/ijsem.0.006839
C25256	JCM 37540T, JCM 37541T, JCM 37542T	Characterization of three novel members of genus Herbiconiux from Neodon fuscus in the Qinghai–Tibet Plateau: description of Herbiconiux liangxiaofengii sp. nov., Herbiconiux wuyangfengii sp. nov. and Herbiconiux liukaitaii sp. nov.	Pu D, Yang J, Chen J, Zhou H, Luo X, Ling Q, Pu J, Zhou H, Xu J	Int J Syst Evol Microbiol	75	006845	2025	40663467	10.1099/ijsem.0.006845
A25257	JCM 16377T, JCM 17313T	Knoellia altitudinis sp. nov., Knoellia pratensis sp. nov., Knoellia terrae sp. nov. and Knoellia tibetensis sp. nov., four novel UV radiation-resistant actinobacteria isolated from Tibet Autonomous Region, China.	Zhang J, Mou T, Li C-J, Bai J-L, Yu L-Y, Chen H-H, Zhang Y-Q	Int J Syst Evol Microbiol	75	006855	2025	40778938	10.1099/ijsem.0.006855
C25258	JCM 36750T	Ovoidimarina sediminis gen. nov., sp. nov., a novel member of the Roseobacteraceae isolated from tidal flat sediment.	Kathiresan A, Jayan J N, Kim H-S, Kim H-S, Li C, Dong K, Srinivasan S, Lee S-S	Int J Syst Evol Microbiol	75	006857	2025	40758410	10.1099/ijsem.0.006857
A25259	JCM 30752T	Nioella halotolerans sp. nov., a novel member of the family Roseobacteraceae, isolated from a saline lake.	Han S-B, Hou X-J, Li Y, He X-L, Wang R-J, Zhu X-F, Wu M	Int J Syst Evol Microbiol	75	006858	2025	40719415	10.1099/ijsem.0.006858
A25260	JCM 17277T	Pseudogemmobacter sonorensis sp. nov., a new alphaproteobacterium isolated from the slime flux of a tree (Populus fremontii) in the Sonoran Desert (Arizona, USA).	Lange-Enyedi N T, Tóth E, Abbaszade G, Németh P, Garvie L A J, Wolf J, Neumann-Schaal M, Khayer B, Sipos G, Makk J	Int J Syst Evol Microbiol	75	006859	2025	40728944	10.1099/ijsem.0.006859
C25261	JCM 9670T, JCM 34827T, JCM 34831T	Curtobacterium phyllosphaerae sp. nov. and Curtobacterium guangdongense sp. nov., isolated from the citrus phyllosphere.	Yang S, Li J, Rong X, Chen Q, Lu X, Zhang J, Deng M-R, Zhu H, Feng G-D	Int J Syst Evol Microbiol	75	006870	2025	40748780	10.1099/ijsem.0.006870
C25262	JCM 37403T, JCM 37404T	Methylobacterium alsaeris sp. nov. and Methylobacterium carpenticola sp. nov., isolated from a car air conditioning system.	Yoon J P, Kim T H, Park S Y, Yoon K Y, Kim H M	Int J Syst Evol Microbiol	75	006884	2025	40811087	10.1099/ijsem.0.006884
C25263	JCM 37116T, JCM 37117T	Cedecea selenatireducens sp. nov. and Rahnella selenatireducens sp. nov., isolated from the seleniferous soil.	Zhang S, Liu Y, Wang H, Peng J, Li K, Jiao Z, Guo Y	Int J Syst Evol Microbiol	75	006885	2025	40787844	10.1099/ijsem.0.006885
A25264	JCM 4387, JCM 4533T	Proposal of Streptomyces janthinus (Artamonova and Krassilnikov 1960) Pridham 1970 (Approved Lists 1980) as a later heterotypic synonym of Streptomyces violaceus (Rossi Doria 1891) Waksman 1953 (Approved Lists 1980) and an emended description of Streptomyces violaceus.	Li K, Qian Y, Li B, Liang W	Int J Syst Evol Microbiol	75	006892	2025	40900621	10.1099/ijsem.0.006892
B25265	JCM 19317T, JCM 37233T	Nitrincola salilacus sp. nov., isolated from Niya Fish Salt Lake Sediment in Xinjiang, Northwest China.	Wang Q, Xiao Y, Gao D, Su L, Yan Y, Zhan Y, Zhou Z, Ke X	Int J Syst Evol Microbiol	75	006894	2025	40875437	10.1099/ijsem.0.006894
A25266	JCM 19537T	Leisingera coralii sp. nov., a bacterium isolated from seawater surrounding Acropora digitata.	Guo X, Sun J, Yu Z, Liu X, Li M, Zhang S, Wang W, Wang X, Zhang Y, Sun H	Int J Syst Evol Microbiol	75	006896	2025	40844915	10.1099/ijsem.0.006896
A25267	JCM 32365T	Proposal of Lysobacter claricitrinus sp. nov., isolated from soil in Japan, and emended description of Lysobacter xanthus Kim et al. 2019.	Mori R, Takagi T, Hamada M, Kutsuna R, Tomida J, Kawamura Y	Int J Syst Evol Microbiol	75	006897	2025	40875390	10.1099/ijsem.0.006897
C25268	JCM 36345T	Streptomyces mayonensis sp. nov., isolated from the volcanic soils of Mt. Mayon, Philippines.	Aguilar G M, Oliveros K M P, Rosana A R R, Opulencia R B, Raymundo A K	Int J Syst Evol Microbiol	75	006900	2025	40889139	10.1099/ijsem.0.006900
C25269	JCM 33153T, JCM 33154T	Psychromonas algicola sp. nov. and Psychromonas algarum sp. nov., two novel bacteria isolated from red macroalgae (Grateloupia sp.).	Fan S-J, Zhang H-Z, Pan B, Liu T-H, Lu D-C, Du Z-J	Int J Syst Evol Microbiol	75	006903	2025	40911467	10.1099/ijsem.0.006903
A25270	JCM 18676T	Butyricimonas muris sp. nov., isolated from mouse faeces.	Xu T, Ju E, Wang Z A, Wei J, Wang Y, Du Y	Int J Syst Evol Microbiol	75	006906	2025	40889135	10.1099/ijsem.0.006906
C25271	JCM 36423T, JCM 36424T	Flavobacterium movens sp. nov. and Flavobacterium mesophilum sp. nov., two novel bacteria isolated from rhizosphere soil of Litchi (Litchi chinensis Sonn.).	Dong Y, Wang X, Liu Y, Feng G-D, Yao Q, Zhu H	Int J Syst Evol Microbiol	75	006908	2025	40938759	10.1099/ijsem.0.006908
C25272	JCM 34096T	Two new members of the family Aerococcaceae: Tuanshanicoccus yangjingiae gen. nov., sp. nov. and Tuanshanicoccus lijuaniae sp. nov., isolated from the trachea of Marmota himalayana.	Zhang G, Cheng Y, Liu Y, Jin D, Lu S, Li W, Pu J, Ge Y, Ma C, Luo W, Xu J	Int J Syst Evol Microbiol	75	006911	2025	40977492	10.1099/ijsem.0.006911
C25273	JCM 36738T	Radicibacter daui, gen. nov., sp. nov., isolated from tomato rhizosphere soil and proposal of Radicibacteraceae fam. nov. and Radicibacterales ord. nov.	Kwon J H, Bultum L E, Lee S, Lee S-M, Choi M, Lee S-W	Int J Syst Evol Microbiol	75	006914	2025	40938766	10.1099/ijsem.0.006914
A25274	JCM 17778T, JCM 19134T, JCM 19135T, JCM 19198T, JCM 19759T, JCM 30134T	Aurantivibrio plasticivorans gen. nov., sp. nov. and Aurantivibrio infirmus sp. nov., biodegradable plastic-degrading bacteria belonging to the family Cellvibrionaceae, isolated from the coast of Japan.	Miura T, Kasaishi R, Hidaka K, Shimamura M, Hamada M, Miyakawa T, Kusuya Y, Ishitani Y, Ishii S, Furuno Y, Yokoyama R, Kato D-I, Arimoto A, Fukuda K, Ueki T, Tagawa K, Uchino Y, Kamino K	Int J Syst Evol Microbiol	75	006920	2025	40971203	10.1099/ijsem.0.006920
A25275	JCM 3175T, JCM 12873T, JCM 13248T	Description of two novel Micromonospora species: Micromonospora psammae sp. nov. from desert soil and Micromonospora lacuserhaii sp. nov. from lake sediment.	Deng Y, Li C-J, Chen H-H, Yu L-Y, Cai M, Zhang Y-Q	Int J Syst Evol Microbiol	75	006922	2025	41004358	10.1099/ijsem.0.006922
C25276	JCM 37394T, JCM 37395T, JCM 37396T	Three novel Luteimonas species from faeces of Cygnus atratus: Luteimonas changyuni sp. nov., Luteimonas yanweni sp. nov. and Luteimonas qiangzhengi sp. nov.	Liu Y, Ma J, Zhou H, Hou Q, Liu J, Wang H, Xiao Q, Luo W, Pu J, Yang J, Ren L, Xu J	Int J Syst Evol Microbiol	75	006923	2025	41004378	10.1099/ijsem.0.006923
C25277	JCM 34654T, JCM 35571T, JCM 35572T	Qipengyuania marincola sp. nov., Qipengyuania flavescens sp. nov. and Pseudoblastomonas aquimaris sp. nov., three novel members of the family Erythrobacteraceae isolated from seawater.	Li T-P, Zhang D-F, Fu Z-Y, Huang M-H	Int J Syst Evol Microbiol	75	006924	2025	40981539	10.1099/ijsem.0.006924
A25278	JCM 19930T	Carbonatibacter coralli gen. nov., sp. nov., a carbonate-producing and vitamin B12-sharing bacterium isolated from coral Porites lutea, reclassification of Kiloniellaceae and proposal of Aestuariispiraceae fam. nov.	Hu S, Lu K, Wang C, Li M, Huang J, Wang G	Int J Syst Evol Microbiol	75	006928	2025	40991451	10.1099/ijsem.0.006928
C25279	JCM 34558T	Nocardioides lacus sp. nov., a novel member of the Actinomycetota isolated from a freshwater pond.	Nam Y H, Jung J Y, Kang H K, Ryu B-G, Hwang Y-J, Kim T J, Lee M-H, Jin H M, Han K-I	Int J Syst Evol Microbiol	75	006929	2025	40996805	10.1099/ijsem.0.006929
C25280	JCM 37321T, JCM 37322T	Aureibaculum koreense sp. nov. and Aureibaculum conchae sp. nov., isolated from the marine molluscs.	Kim S-B, Kim K H, Park J-S	Int J Syst Evol Microbiol	75	006933	2025	41042684	10.1099/ijsem.0.006933
A25281	JCM 14710T	Genome-based classification of members in the genus Actinoplanes and its closely related genera and description of Actinoplanes oryzae sp. nov. and reclassification of Couchioplanes caeruleus subsp. azureus as Couchioplanes azureus sp. nov.	Kaewkla O, Sukpanoa S, Suriyachadkun C, Klankeo P, Papayrata C, Franco C M M	Int J Syst Evol Microbiol	75	006939	2025	41335122	10.1099/ijsem.0.006939
C25282	JCM 33877T	Description of two novel species of the genus Chryseobacterium: Chryseobacterium chendengshani sp. nov. and Chryseobacterium wangxinyae sp. nov., isolated from soil of the Qinghai–Tibet Plateau.	Chen Y, Ma C, Zhao L, Lei W, Yang J, Hou Q, Zhang G, Ning S, Jin D, Lu S, Xu J	Int J Syst Evol Microbiol	75	006941	2025	41191400	10.1099/ijsem.0.006941
C25283	JCM 34793T, JCM 34797T	Pantoea phosphatilytica sp. nov. and Pantoea phyllosphaerae sp. nov., two phosphate-solubilizing and siderophore-producing bacteria isolated from citrus phyllosphere.	Yang S, Li J, Zhang J, Luo H, Dong H, Deng M-R, Zhu H, Feng G-D	Int J Syst Evol Microbiol	75	006942	2025	41123959	10.1099/ijsem.0.006942
C25284	JCM 36616T	Description of Enterovibrio litoreus sp. nov., isolated from a river estuary.	Sakaguchi M, Urbanczyk Y, Kikuchi T, Urbanczyk H	Int J Syst Evol Microbiol	75	006946	2025	41150733	10.1099/ijsem.0.006946
A25285	JCM 18359T	Enterococcus infantis sp. nov., isolated from the faeces of an infant with atopic dermatitis.	Chan C-K, Tsai L-J, Otoguro M, Yanagida F, Lee Y-S, Wu H-C, Chang Y-C, Chen Y-S	Int J Syst Evol Microbiol	75	006950	2025	41134294	10.1099/ijsem.0.006950
A25286	JCM 9687T	Saccharopolyspora antibiotica sp. nov. and Micromonospora mangrovicola sp. nov., the new actinomycetes isolated from mangrove sediments.	Kanchanasin P, Somphong A, Suriyachadkun C, Tanasupawat S, Sripreechasak P, Phongsopitanun W	Int J Syst Evol Microbiol	75	006954	2025	41160440	10.1099/ijsem.0.006954
A25287	JCM 18140T	Parapedomonas caeni gen. nov., sp. nov., a novel bacterium of the family Sphingosinicellaceae isolated from activated sludge.	Jiao D, Chen H, Dai J, Wang J, Wang X, Zhang Y, Liu Y, Wang S, Li W, Jiang A, Zeng H, Qiu D	Int J Syst Evol Microbiol	75	006959	2025	41166405	10.1099/ijsem.0.006959
C25288	JCM 37414T, JCM 37415T	Mycobacterium camsae sp. nov. and Mycobacterium pumcae sp. nov., two species isolated from human skin infection.	Mei Y, Zhang W, Shi Y, Jiang H, Zhang Q, Gan T, Peng J, Mei H, Mo S, Wang H	Int J Syst Evol Microbiol	75	006960	2025	41236790	10.1099/ijsem.0.006960
A25289	JCM 32494T, JCM 35005T	Mumia spirodelae sp. nov., a novel actinobacterium isolated from greater duckweed (Spirodela polyrhiza).	Vitoonpanyakit T, Suriyachadkun C, Duangmal K	Int J Syst Evol Microbiol	75	006961	2025	41191404	10.1099/ijsem.0.006961
A25290	JCM 21532T	Pseudomonas tussilaginis sp. nov., isolated from leaves of coltsfoot growing in mercury-contaminated soil.	Juszczyk A, Kowalczyk A, Rogala M, Gurgul A, Jasielczuk I, Szmatoła T, Bojko M, Płaza G, Jałowiecki , Borgulat J, Noga T, Wójcik K, Waś K, Duman M, Szmuc J, Głuchowska E, Kosecka-Strojek M, Latowski D	Int J Syst Evol Microbiol	75	006968	2025	41236807	10.1099/ijsem.0.006968
A25291	JCM 19881T	Bradyrhizobium monzae sp. nov. isolated from a root nodule of the introduced legume Crotalaria ochroleuca in Uruguay.	Revetria M A M, Sanjuan J, Berriel V, Velázquez E	Int J Syst Evol Microbiol	75	006973	2025	41259095	10.1099/ijsem.0.006973
C25292	JCM 37223T	Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges.	Moon Y-L, Park J-S	Int J Syst Evol Microbiol	75	006980	2025	41307941	10.1099/ijsem.0.006980
C25293	JCM 35392T	Agarivorans sediminis sp. nov., an alginate-degrading bacterium isolated from sediment.	Bae S S, Jung Y-H, Kwon Y M, Chung D, Yu W-J, Kim T W, Hwang H-J	Int J Syst Evol Microbiol	75	006988	2025	41335121	10.1099/ijsem.0.006988
C25294	JCM 36479T	Croceiramulus getboli gen. nov., sp. nov., a marine bacterium isolated from the tidal flat	Yoo Y, Lee S H, Kwon D Y, Khim J S, Xu X, Kim B, Choi I-G, Kim J-J	Int J Syst Evol Microbiol	75	006995	2025	41417013	10.1099/ijsem.0.006995
B25295	JCM 17861T, JCM 37802T, JCM 37803T	Flagellimonas ulvae sp. nov. and Flagellimonas rhodophyticola sp. nov., isolated from marine algae.	Won H S, Han D M, Kim J M, Bayburt H, Choi B J, Quan Z-X, Jeon C O	Int J Syst Evol Microbiol	75	006996	2025	41364487	10.1099/ijsem.0.006996
C25296	JCM 39573T	Thermorhabdus hydrogeniformans gen. nov., sp. nov., a thermophilic anaerobic bacterium from hot spring sediments in Tengchong, Yunnan, China.	Xu J, Yu T, Wang F	Int J Syst Evol Microbiol	75	006997	2025	41406016	10.1099/ijsem.0.006997
C25297	JCM 37826T, JCM 37827	Vibrio sabulosilitoris sp. nov., a novel marine bacterium in the Agarivorans clade within the family Vibrionaceae, isolated from a sandy beach in Fukui, Japan.	Machii Y, Tsukiyama K, Kataoka T, Kondo R	Int J Syst Evol Microbiol	75	007000	2025	41369525	10.1099/ijsem.0.007000
B25298	JCM 16701T, JCM 36702T	Methylomonas stagni sp. nov., a methanotroph of the genus Methylomonas, from a reservoir pond in Korea.	Gwak J-H, Seo C, Kim Y, Park J-W, Rhee S-K	Int J Syst Evol Microbiol	75	007002	2025	41417646	10.1099/ijsem.0.007002
A25299	JCM 1190T	Agglutination of Escherichia coli, Clostridium perfringens, and Salmonella enterica through competitive exclusion using potassium chloride with gum arabic.	Uehara A, Maekawa M, Sakamoto Y, Nakagawa K	Int Microbiol	28	1433-1448	2025	39738815	10.1007/s10123-024-00625-4
C25300	JCM 37097T, JCM 37098, JCM 37099T	Biodiversity of strains belonging to the freshwater genus Aquirufa in a riparian forest restoration area in Salzburg, Austria, with a focus on the description of Aquirufa salirivi sp. nov. and Aquirufa novilacunae sp. nov.	Pitt A, Lienbacher S, Schmidt J, Neumann-Schaal M, Wolf J, Wenng H, Oren A, Huber Z, Hahn M W	Int Microbiol	28	1635-1647	2025	39964655	10.1007/s10123-025-00642-x
A25301	JCM 14847	Perturbation of EPHA2 and EFNA1 trans binding amplifies inflammatory response in airway epithelial cells.	Fukuda R, Beppu S, Hinata D, Kamada Y, Okiyoneda T	iScience	28	111872	2025	39991543	10.1016/j.isci.2025.111872
A25302	JCM 13464T, JCM 33280T	Dietary fermentable polyols fuel gut inflammation through M1 macrophage polarization and gut microbiota.	Sato K, Tomioka M, Akiyama M, Matsuda Y, Hara H, Sasa H, Kurashima Y, Inoue J, Fukuda S, Kim Y-G	iScience	28	112934	2025	40678521	10.1016/j.isci.2025.112934
A25303	JCM 1290T, JCM 1297T, JCM 3817, JCM 6328, JCM 6421T, JCM 6480T, JCM 6501, JCM 8138T, JCM 8532T, JCM 9340T, JCM 9978T, JCM 10283, JCM 10412T, JCM 11023T, JCM 11025T, JCM 12990T, JCM 13470T, JCM 15078T, JCM 15631T, JCM 16078T, JCM 16571T, JCM 16772T, JCM 17463T, JCM 17583T, JCM 17584T, JCM 30893, JCM 31255, JCM 31260, JCM 31262, JCM 31264, JCM 33112, JCM 35487, JCM 35490, JCM 39207, JCM 39209	Clostridium butyricum-altered lung microbiome is associated with enhanced anti-influenza effects via G-protein-coupled receptor120.	Hagihara M, Yamashita M, Ariyoshi T, Minemura A, Yoshida C, Higashi S, Oka K, Takahashi M, Ota A, Maenaka A, Iwasaki K, Hirai J, Shibata Y, Umemura T, Mori T, Kato H, Asai N, Mikamo H	iScience	28	113502	2025	41035679	10.1016/j.isci.2025.113502
A25304	JCM 7687T, JCM 11887T, JCM 12110T	Impact of acetate on CO2 fixation pathways in thermophilic and hydrogenotrophic bacteria.	Chiba Y, Sumida T, Kameya M, Fukuyama Y, Wakashima T, Shimamura S, Kamikawa R, Chikaraishi Y, Nunoura T	ISME Commun	5	227	2025	41459348	10.1093/ismeco/ycaf227
A25305	JCM 5825T, JCM 9497T, JCM 39207, JCM 39210T, JCM 39211T	Targeted prebiotic application of gluconic acid-containing oligosaccharides promotes Faecalibacterium growth through microbial cross-feeding networks.	Negishi H, Ichikawa A, Takahashi S, Kano H, Makino S	ISME J	19	027	2025	39936592	10.1093/ismejo/wraf027
A25306	JCM 6269T, JCM 10668, JCM 10724T, JCM 11576T, JCM 11603T, JCM 16871T, JCM 19176T, JCM 21311T, JCM 31434T, JCM 33999, JCM 34562, JCM 34718	Rapid water flow triggers long-distance positive rheotaxis for thermophilic bacteria.	Uemura N A, Chiba N, Morikawa R, Tamakoshi M, Nakane D	ISME J	19	164	2025	40748249	10.1093/ismejo/wraf164
A25307	JCM 30642T	Unusual cell surfaces, pili, and archaella of Thermoplasmatales archaea.	Gaines M C, Isupov M N, McLaren M, Haque R U, Recalde A, Bargiela R, Gold V A M, Albers S-V, Golyshin P N, Golyshina O V, Daum B	ISME J	19	176	2025	40801261	10.1093/ismejo/wraf176
C25308	JCM 37573	In situ degradation of 2-methylnaphthalene by a soil Penicillium strain associated with fungal–bacterial interactions.	Li J, Cai X, Li M, Zhang D, Li B, Jin L N, Luo C, Zhang G	ISME J	19	260	2025	41288576	10.1093/ismejo/wraf260
A25309	JCM 13569T, JCM 15297T, JCM 15300T	Combined dual β-lactams and diazabicyclooctane β-lactamase inhibitor is highly effective against Mycobacterium abscessus species in vitro.	Misawa K, Nishimura T, Yoshikawa M, Shimamura R, Kashimura S, Enoki Y, Taguchi K, Matsumoto K, Hasegawa N	J Global Antimicrob Resist	42	142-150	2025	40015478	10.1016/j.jgar.2025.02.015
A25310	JCM 22676	Structural insights into substrate recognition of tri-modular xyloglucanase from Aspergillus oryzae.	Nakamichi Y, Shimada N, Watanabe M, Fujii T, Yaoi K, Matsuzawa T	J Struct Biol	217	108213	2025	40414580	10.1016/j.jsb.2025.108213
A25311	JCM 1192T, JCM 1273, JCM 7017, JCM 7019	Heterologous Expression and Polyphasic Analysis of CLA-Converting Linoleic Acid Isomerase from Bifidobacterium breve JKL2022	Elnar A G, Jang Y, Kim G-B	J Agric Food Chem	73	1425–1440	2025	39586027	10.1021/acs.jafc.4c05746
A25312	JCM 20190T	Antibacterial potential of cell-free supernatants from Liquorilactobacillus nagelii and Lactococcus garvieae isolated from the gastrointestinal tract of Asian green mussel (Perna viridis) against foodborne pathogenic and spoilage bacteria.	Kumari J, Singh A, Pahumunto N, Benjakul S, Buatong J	J Agric Food Res	21	101855	2025		10.1016/j.jafr.2025.101855
A25313	JCM 20190T	Synergistic effect of hyperoside and amentoflavone found in cashew leaf crude extract and potassium sorbate on inhibition of food spoilage bacteria.	Sinlapapanya P, Palamae S, Buatong J, Saetang J, Zhang B, Fu Y, Benjakul S	J Agric Food Res	21	101886	2025		10.1016/j.jafr.2025.101886
A25314	JCM 20190T	The combined effect of free or encapsulated ethanolic cashew leaf extract and high-pressure processing (HPP) on shelf-life extension of refrigerated Nile tilapia slices.	Sinlapapanya P, Palamae S, Buatong J, Fu Y, Zhang B, Yin T, Benjakul S	J Agric Food Res	22	102065	2025		10.1016/j.jafr.2025.102065
C25315	JCM 37027T	Streptomyces tabacisoli sp. nov, isolated from the rhizosphere soil of Nicotiana tabacum.	Li K, Zhang H, Qian Y, Mo P, Deng A, Gao J, Liang W	J Antibiot	78	229-234	2025	39962293	10.1038/s41429-024-00802-7
A25316	JCM 6384T, JCM 15430	Micrococcins from Peribacillus sp. KDM594; efficacy against vancomycin-resistant enterococci and drug metabolism in a silkworm model.	Yagi A, Sato M, Kikuchi K, Taniguchi A, Fukuda T, Uchida R	J Antibiot	78	481-487	2025	40500348	10.1038/s41429-025-00838-3
C25317	JCM 37325T	Streptomyces secundicynarae sp. nov., a novel actinomycete isolated from the leaves of Cynara scolymus.	Song Y, Tang T, Mo P, Wu Z, Liu F, Deng A	J Antibiot	78	593-599	2025	40731096	10.1038/s41429-025-00853-4
A25318	JCM 36731	A new cannabigerolic acid derivative and its unprenylated precursor produced through the reconstitution of cannabinoid biosynthesis in Streptomyces.	Kudo K, Nishimura T, Miyako K, Suenaga H, Shin-Ya K	J Antibiot	78	126-130	2025	39627321	10.1038/s41429-024-00793-5
C25319	JCM 37520T	Streptomyces cyclosori sp. nov., a novel actinobacterium from the rhizosphere soil of Cyclosorus parasiticus (L.) Farw.	Gao R, Chen Y, Xiao Y, Gao J	J Antibiot	78	666-673	2025	40796657	10.1038/s41429-025-00857-0
A25320	JCM 1209, JCM 1222T, JCM 5826T, JCM 5827T, JCM 6515T, JCM 9498T, JCM 13470T, JCM 15631T, JCM 16067T, JCM 17581T, JCM 30893, JCM 31915T, JCM 33480T	Heterologous Expression and Characterization of Cellouronate (β-1,4-Glucuronan) Lyase from a Human Intestinal Bacterium Bacteroides luhongzhouii.	Tanaka Y, Matsumura K, Ariga M, Konno N, Ogata M, Habu N	J Appl Glycosci	72	7203102	2025	40950774	10.5458/jag.7203102
A25321	JCM 5824T, JCM 5826T, JCM 5827T, JCM 5828T, JCM 9498T, JCM 12986T, JCM 13346, JCM 13471T, JCM 15632T, JCM 16067T, JCM 16102T, JCM 16478T, JCM 19687	A Horizontally Transferred Alginate Metabolism Gene Cluster in the Human Gut Genus Bacteroides.	Miyamoto Y, Katsuhiro N, Okumura K, Takase R, Watanabe D, Ogura K, Hashimoto W	J Appl Glycosci	72	7204106	2025	41357778	10.5458/jag.7204106
A25322	JCM 17466T	Characterization of a Fructan Exohydrolase from the Gut Bacterium Anaerostipes butyraticus.	Baula M A B, Sekine M, Kozono T, Nishikawa A, Kitano Y, Endo A, Tonozuka T	J Appl Glycosci	72	7204102	2025	41357771	10.5458/jag.7204102
A25323	JCM 5826T, JCM 13471T	Phocaeicola dorei and Phocaeicola vulgatus Protect against Atherosclerosis by Regulating Gut Immunity.	Nakashima H, Shinohara R, Emoto T, Saito Y, Yoshida N, Hirata K-I, Murakami T, Mori H, Toyoda A, Sugiyama T, Yamada T, Yamashita T	J Atheroscler Thromb	32	1447-1463	2025	40533160	10.5551/jat.65460
A25324	JCM 33616T	Structural analysis of a symbiotic system involving a Nanobdellati archaeon by cryo-electron tomography.	Goto-Ito S, Kato S, Takahashi M, Sakamoto A, Yamagata A, Lee Y, Ehara H, Sato M, Toyooka K, Ohkuma M, Ito T	J Biochem	179	21-30	2025	40855682	10.1093/jb/mvaf049
A25325	JCM 5803T, JCM 5885	Identification and characterization of a circular bacteriocin, garvicin SC, a novel garvicin ML variant, produced by Lactococcus garvieae ABG0038.	Komori Y, Ozawa N, Kuwahara H, Zendo T, Aoki M	J Biosci Bioeng	139	95-99	2025		10.1016/j.jbiosc.2024.10.008
A25326	JCM 2414T, JCM 5827T	Reproducing in vitro artificial gut microbiota using glycerol stocks of fecal cultures combined with different prebiotic additives.	Sasaki K, Takeshima Y, Fujino A	J Biosci Bioeng	140	154-161	2025	40592615	10.1016/j.jbiosc.2025.06.002
A25327	JCM 1002T, JCM 1059T, JCM 1112T, JCM 1120T, JCM 1132T, JCM 1149T, JCM 1173T, JCM 1649T, JCM 8130T	Extracellular vesicles derived from specific lactic acid bacteria have agonistic activity against formyl peptide receptor 2.	Sugahara H, Nagayama K, Sashihara K, Nagatomi Y	J Biosci Bioeng	140	21-27	2025	40379531	10.1016/j.jbiosc.2025.04.009
A25328	JCM 1134T, JCM 1217T	Construction of a simplified co-culture system using MDCK cells as surrogate intestinal epithelium with intestinal anaerobic bacterial mixtures.	Umehara Y, Aoyagi H	J Biosci Bioeng	140	228-236	2025	40683783	10.1016/j.jbiosc.2025.06.010
A25329	JCM 20644	Acetate-mediated two-stage microbial production of poly[(R)-3-hydroxybutyrate] (PHB) from CO2 and H2 using a synthetic medium free of vitamins and cysteine.	Ren H, Ninomiya K	J Biosci Bioeng	140	42-49	2025	40368746	10.1016/j.jbiosc.2025.04.004
A25330	JCM 15300T	Lipid fingerprinting by MALDI Biotyper Sirius instrument fails to differentiate the three subspecies of the Mycobacterium abscessus complex.	Yoshida M, Fukano H, Yahara K, Nakano S, Komine T, Suzuki M, Fujinaga A, Doke K, Hoshino Y	J Clin Microbiol	63	e0148424	2025	40084837	10.1128/jcm.01484-24
A25331	JCM 1222T, JCM 15439T	Human milk oligosaccharides and infant gut microbiome in Mongolian mother-infant dyads.	Davaanyam E, Otgonbaatar U, Nakajima A, Sakanaka M, Ojima M N, Kozakai T, Katoh T, Odamaki T, Javzan B, Dagvadorj E, Bekh-Ochir D, Katayama T	J Dairy Sci	108	11871-11888	2025	40912567	10.3168/jds.2025-26865
A25332	JCM 1254, JCM 1255T	Characterization of Bifidobacterium bifidum growth and metabolism on whey protein phospholipid concentrate.	Kim Y-T, Huang Y-P, Ozturk G, Hahn J, Taha A Y, Wang A, Barile D, Mills D A	J Dairy Sci	108	3366-3381	2025	39788196	10.3168/jds.2024-25885
A25333	JCM 5818T, JCM 6985T, JCM 7446, JCM 8570, JCM 8572T, JCM 8573T	Identification of dominant species common to kefir grains from 7 origins for kefir grain reconstruction.	Motoshima H, Fujioka I, Uchida K	J Dairy Sci	108	8222-8236	2025	40447090	10.3168/jds.2025-26399
A25334	JCM 1717T	Antibiotic-loaded Lactobacillus-derived extracellular vesicles enhance the bactericidal efficacy against Staphylococcus species.	Lee Y, Cho H, Kim K-S	J Drug Delivery Sci Technol	105	106607	2025		10.1016/j.jddst.2025.106607
A25335	JCM 8525, JCM 12257T	Efficacy of toothpaste containing Brazilian green propolis extracts with an optimal kaempferide/betuletol ratio for improving oral microbiota: A randomized, controlled, paired crossover study.	Amano S, Matsumoto M, Morimoto M, Kawamoto H, Takeshita F, Yasui T, Sakagami H	J Ethnopharmacol	337	118762	2025	39214193	10.1016/j.jep.2024.118762
A25336	JCM 37406, JCM 37710, JCM 37711, JCM 37714	Ruegeria strains promote growth and morphogenesis of the giant coenocytic alga Bryopsis.	Ochiai K K, Goshima G	J Exp Bot	76	6005-6015	2025	40515619	10.1093/jxb/eraf262
A25337	JCM 2507T, JCM 11466T, JCM 13339, JCM 21743T	Optimization of Spore Purification and Quality Assessment in Paenibacillus Species.	Kawai S, Nakano M	J Food Prot	88	100595	2025	40774540	10.1016/j.jfp.2025.100595
A25338	JCM 1233T, JCM 1238T, JCM 1242T, JCM 1245T, JCM 1661T, JCM 1666T, JCM 1667T, JCM 1687T, JCM 1688T, JCM 2023, JCM 6096T, JCM 7251T, JCM 9698T, JCM 11052, JCM 12536T	Rapid Detection of Pseudomonas in Spoiled Meats by Lateral Flow Immunochromatographic Assay.	Tominaga T, Aiki K, Kushida A, Tsuchiya R	J Food Saf	45	e70027	2025		10.1111/jfs.70027
A25339	JCM 1462T, JCM 2466T, JCM 2938T, JCM 2941T, JCM 9195T, JCM 9197, JCM 9198, JCM 9580T, JCM 9937T, JCM 9939T, JCM 9940T, JCM 11168T, JCM 11170T	Whole-Genome Sequencing and Comparative Genomic Analysis of Three Clinical Bloodstream Infection Isolates of Trichosporon austroamericanum.	Horiguchi T, Umeyama T, Tomuro H, Otani A, Shinohara T, Abe M, Takatsuka S, Miyazawa K, Nagi M, Muraosa Y, Hoshino Y, Sakoh T, Araoka H, Uchida N, Kaneko T, Nagano Y, Tsukada H, Miyazaki T, Miyazaki Y	J Fungi	11	401	2025	40422735	10.3390/jof11050401
A25340	JCM 1131T, JCM 10742T	Production of Lactate by Metabolically Engineered Scheffersomyces stipitis.	Matanović A, Marđetko N, Slišković A, Didak B, Čiča K H, Žunar B, Štafa A, Šantek B, Miklenić M S, Svetec I-K	J Fungi	11	413	2025	40558924	10.3390/jof11060413
A25341	JCM 3225T	Functional characterization of the mys genes for porphyra-334 biosynthesis from the terrestrial cyanobacterium Nostoc commune by heterologous expression.	Yang W, Sakamoto T	J Gen Appl Microbiol	71	19–27	2025	40451803	10.2323/jgam.2025.05.002
A25342	JCM 1318T	Production of glycolic acid through whole-cell bioconversion from PET monomer ethylene glycol using engineered Corynebacterium glutamicum.	Ghiffary M R, Wong F T, Lim Y H	J Ind Microbiol Biotechnol	52	kuaf033	2025	41316996	10.1093/jimb/kuaf033
A25343	JCM 3095T	Catalytic and post-translational maturation roles of a conserved active site serine residue in nitrile hydratases.	Miller C, Knutson K, Liu D, Bennett B, Holz R C	J Inorg Biochem	262	112763	2025	39447484	10.1016/j.jinorgbio.2024.112763
A25344	JCM 11832T, JCM 13430T	Monomeric class II chelatase with four histidine residues at the active site, designated Mch4 chelatase, shows evolutionary trails from ancestral to descendant-types.	Ogawa S, Oyamada Y, Saito H, Fujishiro T	J Inorg Biochem	272	113010	2025	40706352	10.1016/j.jinorgbio.2025.113010
A25345	JCM 2414T, JCM 13389T	Microbial dysbiosis and foot odor in Nagashima-type palmoplantar keratosis: Improvement with topical benzoyl peroxide.	Ono N, Ito Y, Aoki S, Shiohama A, Sasaki T, Kurokawa R, Suda W, Amagai M, Kubo A	J Invest Dermatol	52	0022-2022503614-0	2025	41338335	10.1016/j.jid.2025.11.011
C25346	JCM 36010T, JCM 36011T	Bacteroides celer sp. nov. and Bacteroides mucinivorans sp. nov., isolated from human feces, and the reclassification of Bacteroides koreensis Shin et al. 2017 and Bacteroides kribbi Shin et al. 2017 as later heterotypic synonyms of Bacteroides ovatus Eggerth and Gagnon 1933 (Approved Lists 1980).	Yang A-I, Kim B, Kang W, Joe H-I, Shin N-R	J Microbiol	63	e2502006	2025	40598995	10.71150/jm.2502006
C25347	JCM 37037T, JCM 37038T	Staphylococcus parequorum sp. nov. and Staphylococcus halotolerans sp. nov., isolated from traditional Korean soybean foods.	Baek J H, Han D M, Choi D G, Moon C Y, Lee J K, Kim C-H, Kim J-W, Jeon C O	J Microbiol	63	e2503003	2025	40878554	10.71150/jm.2503003
C25348	JCM 35528T, JCM 35752T	Phycobium rhodophyticola gen. nov., sp. nov. and Aliiphycobium algicola gen. nov., sp. nov., isolated from the phycosphere of marine red algae.	Kim J M, Baek W, Choi B J, Bayburt H, Lee J K, Lee S C, Jeon C O	J Microbiol	63	e2503014	2025	40598999	10.71150/jm.2503014
C25349	JCM 37574T, JCM 37575T	Haloimpatiens sporogenes sp. nov. and Haloimpatiens myeolchijeotgali sp. nov., anaerobic bacteria isolated from Myeolchi-jeot, a traditional Korean fermented anchovy.	Lee Y J, Chun B H	J Microbiol	63	e2504009	2025	40741632	10.71150/jm.2504009
C25350	JCM 37728T	Genome-based classification of Paraniabella aurantiaca gen. nov., sp. nov., isolated from soil and taxonomic reclassification of five species within the genus Niabella.	Kim Y-S, Yang Y, Kim M, Lee D-H, Cha C-J	J Microbiol	63	e2505005	2025	41164960	10.71150/jm.2505005
C25351	JCM 37965T, JCM 37966T	Lactiplantibacillus koreensis sp. nov. and Lactiplantibacillus kimchii sp. nov., isolated from kimchi, a traditional Korean fermented food.	Lee M J, Lee J, Nam S, Jung M-J, Kim Y B, Kim Y, Yun J U, Roh S W, Whon T W, Jeon C O, Lee S H	J Microbiol	63	e2507007	2025	41309231	10.71150/jm.2507007
C25352	JCM 35894T, JCM 36590T	Mucilaginibacter florum sp. nov., isolated from the flower of Coreopsis grandiflora and Mucilaginibacter oryzagri sp. nov., isolated from rice paddy soil in Korea.	Subramanian P, Heo J, Lee D, Kim S, Choi H, Choi Y, Kim Y	J Microbiol	63	e2509014	2025	41486931	10.71150/jm.2509014
A25353	JCM 21584T	Overcoming barriers to nicotine-degrading bacteria isolation in oral microbiome research.	Goyal H, Mehta N, Gupta A, Shrivastava R, Gautam V	J Microbiol BiolEduc	26	e0023924	2025	40207943	10.1128/jmbe.00239-24
C25354	JCM 37392T, JCM 37393T	Microbacterium chionoecetis sp. nov. and Agrococcus chionoecetis sp. nov.: Novel Gut Bacteria from Red Snow Crab.	Chaudhary D K, Kim S-E, Park H-J, Kim K-H	J Microbiol Biotechnol	35	e2412044	2025	40295198	10.4014/jmb.2412.12044
A25355	JCM 2504T, JCM 2505T, JCM 2506T, JCM 2508T	Isolation and Characterization of a Bacillus amyloliquefaciens Bacteriophage JBA6 and Its Endolysin PlyJBA6.	Kim J, Kong M	J Microbiol Biotechnol	35	e2502026	2025	40174924	10.4014/jmb.2502.02026
C25356	JCM 37496T, JCM 37497T	Carotenoid-Producing Qipengyuania algicola sp. nov. and Qipengyuania rhodophyticola sp. nov., Isolated from Marine Algae, and Emended Description of the Genus Qipengyuania Xu et al. 2020,	Lee J K, Lee M W, Moon C Y, Kim J M, Bayburt H, Choi B J, Jeon C O	J Microbiol Biotechnol	35	e2507023	2025	40967910	10.4014/jmb.2507.07023
A25357	JCM 1027T, JCM 2385T, JCM 7373T, JCM 7375T, JCM 8238T	Development of polymerase chain reaction assays specific for individual pathogenic Aeromonas species.	Uno Y, Umeki K, Yamada A, Hashikura Y, Nomura H, Hayashi M, Umekita K	J Microbiol Methods	235	107142	2025	40324564	10.1016/j.mimet.2025.107142
A25358	JCM 1245T, JCM 2023, JCM 9502, JCM 9698T, JCM 11032, JCM 11052, JCM 12424, JCM 12428, JCM 12430, JCM 12431, JCM 12433, JCM 12435, JCM 12441, JCM 12443	Rapid detection of Fructilactobacillus sanfranciscensis in sourdough by lateral flow immunochromatographic assay.	Aiki K, Tominaga T	J Microbiol Methods	238	107256	2025	40957500	10.1016/j.mimet.2025.107256
A25359	JCM 1431T, JCM 2507T, JCM 9075T	Analysis of vegetative cells and spore germination in food using flow cytometry.	Kawai S, Nakano M	J Microbiol Methods	232-234	107137	2025	40288443	10.1016/j.mimet.2025.107137
A25360	JCM 12221T, JCM 15732T	Evolution and Functional Diversification of Serine Racemase Homologs in Bacteria.	Uda K, Nishimura R, Li Y, Shimoda E, Miyamoto T, Moe L A	J Mol Evol	93	149-162	2025	39821316	10.1007/s00239-024-10231-7
A25361	JCM 23043	Discovery, Biological Activity, and Biosynthesis of Pinocicolin A, an Antibiotic Isocyanide Metabolite Produced by Penicillium pinophilum.	Kishimoto S, Takahashi R, Nagasawa A, Watanabe K	J Nat Prod	88	1068-1074	2025	40180616	10.1021/acs.jnatprod.5c00174
A25362	JCM 17136T	1-Kestose Prevents Psychiatric-Like Behavior by Enhancing Short-Chain Fatty Acid Production.	Tanabe M, Kunisawa K, Fujii T, Tochio T, Hirooka Y, Ojika H, Naruoka Y, Ito H, Saito K, Nabeshima T, Mouri A	J Neurochem	169	e70273	2025	41267172	10.1111/jnc.70273
A25363	JCM 6480T	Reactivation of Epstein-Barr virus by n-butyric acid from Pseudoramibacter alactolyticus induces inflammatory cytokines in periapical granulomas.	Miyata T, Takeichi O, Imai K, Okano M, Inoue S, Yasukawa T, Suzuki Y	J Oral Biosci	67	100569	2025	39401546	10.1016/j.job.2024.10.001
A25364	JCM 1504T, JCM 1537T, JCM 1541T, JCM 1618, JCM 3761T	Candida albicans and NCAC species: acidogenic and fluoride-resistant oral inhabitants.	Mousa H R F, Abiko Y, Washio J, Sato S, Takahashi N	J Oral Microbiol	17	2473938	2025	40052107	10.1080/20002297.2025.2473938
A25365	JCM 13865T	Intraoral treatment of persimmon tannin, a polyphenol extracted from persimmon, significantly ameliorates gingivitis, plaque and halitosis via directly influence the periodontal bacteria Porphyromonas gulae.	Toyooka M, Kaneki M, Ohira C, Hachiya A, Fukuyama T	J Pharmacol Sci	157	203-211	2025	40058939	10.1016/j.jphs.2025.02.001
A25366	JCM 2413	Silver ions and bacteria as promoters of UV-A photocatalysis.	Iwabuchi T, Tenkumo T, Mokudai T, Ogawa T, Sasaki K, Yoda N	J Photochem Photobiol, A	463	116269	2025		10.1016/j.jphotochem.2025.116269
A25367	JCM 1149T	Lactobacillus plantarum JCM 1149 Growth Enhancement by using Chlorella sp. KLSc61-pretreated Cells.	Khanrin L, Boonyakorn P, Wongsariya K, Kittiwongwattana C, Kittiwongwattana C, Leerojanaprapa K, Dejtisakdi W	J Pure Appl Microbiol	19	1071-1084	2025		10.22207/JPAM.19.2.10
A25368	JCM 1149T, JCM 1465T, JCM 13063T, JCM 20135, JCM 21448T	Improving Machine Learning–Based Bacterial Discrimination by Learning Single-Cell Raman Data From Multiple Growth Phases.	Oda N, Kanno N, Kato S, Ohkuma M, Shigeto S	J Raman Spectr	56	481-490	2025		10.1002/jrs.6804
A25369	JCM 3257T, JCM 15292T, JCM 30529T	Multi-omics analyses uncovering the biosynthetic potential of novel Micromonospora species isolated from desert and marine habitats.	Han J-R, Li S, Lian W-H, Xu L, Duan L, Li J-L, Feng C-Y, Shi G-Y, Liu W-L, Wei Q-C, Li W-J, Dong L	J Syst Evol	63	1115-1132	2025		10.1111/jse.13183
A25370	JCM 17328T	Evaluation of a novel modified selective medium cefixime-tellurite-phosphate-xylose-rhamnose MacConkey agar for the isolation of Escherichia albertii from diarrheal stool specimens.	Takehira K, Awasthi S P, Hatanaka N, Nagita A, Hinenoya A, Yamasaki S	J Vet Med Sci	87	308-314	2025	39864865	10.1292/jvms.24-0500
A25371	JCM 5673, JCM 5709T	Development of primers for loop-mediated isothermal amplification for Mycoplasma canadense detection.	Kusumoto A, Matsuzawa K, Itoh M	J Vet Med Sci	87	575-579	2025	40204470	10.1292/jvms.24-0303
A25372	JCM 13569T, JCM 15429	Bactericidal Effect of IonlessⓇ Hypochlorous Acid Water (Purified Hypochlorous Acid Water) CLFineⓇ on Nontuberculous Mycobacteria. (in Japanese)	Shiozawa A, Kajiwara C, Fuketa H, Kawamura N, Tateda K	Japanese Journal of Infection Prevention and Control	40	13-17	2025		10.4058/jsei.40.13
A25373	JCM 13569T, JCM 15297T, JCM 15300T	Methods and Challenges in Detecting Subspecies of Mycobacterium abscessus Based on a Case of Otitis Media.	Kashiwagi K, Yoshizawa S, Yamaguchi T, Kajiwara R, Shiozawa A, Maeda T, Fukano H, Yoshida M, Hoshino Y, Ishii Y, Tateda K	Journal of Hospital General Medicine	7	248-252	2025		10.60227/jhgmeibun.2025-0003
A25374	JCM 5705T	Effect of curcumin on growth and biofilm formation against Streptococcus mutans.	Kanda R, Yoshimatsu H, Lyu X	Journal of Osaka Dental University	59	13-18	2025		10.18905/jodu.59.1_13
C25375	JCM 36756T	Bacillus spongicola sp. nov., isolated from a marine sponge (Jaspis coreana) collected in the Republic of Korea.	Moon Y-L, Kim K-H, Han S-M, Park J-S	Korean Journal of Microbiology	61	308-318	2025		10.7845/kjm.2025.5088
C25376	JCM 37060T, JCM 37061T	Thalassobellus sediminis sp. nov. and Thalassobellus citreus sp. nov., isolated from tidal flat sediment.	Yang S H, Park M-J, Oh H-M, Park Y-J, Kwon K K	Korean Journal of Microbiology	61	44-60	2025		10.7845/kjm.2025.5006
C25377	JCM 37104T	Paracoccus broussonetiae subsp. drimophilus subsp. nov., a Novel Subspecies Salt-Tolerant Endophytic Bacterium from Maize Root in Hunan.	Li X, Zhou C, Li M, Zhang Q, Su L, Li X	Life	15	354	2025	40141699	10.3390/life15030354
A25378	JCM 2504T, JCM 2505T, JCM 2506T, JCM 2508T	Characterization of an endolysin from B. cereus-infecting bacteriophage B13S and its application as antimicrobial and detection agents.	Yu B, Kong M	LWT	216	117345	2025		10.1016/j.lwt.2025.117345
A25379	JCM 2505T	Characterization of a novel bacteriophage PS1 targeting Bacillus licheniformis for biocontrol application in dairy products.	Kim M, Son B	LWT	225	117645	2025		10.1016/j.lwt.2025.117645
A25380	JCM 1275T	Temperature-controlled subcritical water treatment for modifying corncob insoluble dietary fiber: A comprehensive evaluation of physicochemical, functional, structural and prebiotic properties.	You Y, Liu C, Li L, Li N, Chen H, Ding C, Qin L, Hu Z	LWT	233	118472	2025		10.1016/j.lwt.2025.118472
A25381	JCM 1222T	Uptake of fucosylated type I human milk oligosaccharide blocks by Bifidobacterium longum subsp. infantis.	Hansen M E, Sakanaka M, Jensen M, Sakanaka H, Pichler M J, Maeda S, Høvring J F, Nakajima A, Kunstmann S, Nielsen T S, Peters G H J, Slotboom D J, Morth J P, Katayama T, Hachem M A	mBio	16	e0036825	2025	40657901	10.1128/mbio.00368-25
A25382	JCM 8557, JCM 9645, JCM 9729, JCM 31123, JCM 32112	Phylogenetic analysis of pathogenic algae reveals lineage-dependent patterns of phagocytosis.	Shave C D, Haider M J A, Onyishi C U, McDonald M C, Stones L, Jagielski T, May R C	mBio	16	e0049825	2025	40304495	10.1128/mbio.00498-25
A25383	JCM 19564T, JCM 32271T	Exploring protein N-glycosylation in ammonia-oxidizing Nitrososphaerota archaea through glycoproteomic analysis.	Nakagawa S, Yagi H, Suyama T, Shimamura S, Yanaka S, Yagi-Utsumi M, Kato S, Ohkuma M, Kato K, Takai K	mBio	16	e0385924	2025	40387319	10.1128/mbio.03859-24
A25384	JCM 31915T	mGem: Faecalibacterium, an important protector of gut health.	Sabater C, Vázquez X, Duncan S H	mBio	17	e0277625	2025	41288371	10.1128/mbio.02776-25
A25385	JCM 8349T, JCM 8353T, JCM 12987T, JCM 15918, JCM 16131T	Actinomyces viscosus promotes neuroprotection in C. elegans models of Parkinson’s disease.	Ngana G S, Bernardo M A D, Surette M G, MacNeil L T	Mech Ageing Dev	225	113010	2025	40258426	10.1016/j.mad.2025.112061
A25386	JCM 2903	Large-Scale Expansion of the MALDI-TOF MS Library for Comprehensive Identification of Yeasts and Filamentous Fungi in Clinical and Sanitary Contexts.	Ban S, Endoh R, Hayashi M, Ito J, Uehara Y, Kota A, Yamashita K, Horiyama M, Miwa K, Oowada T, Yaguchi T, Tanaka K, Ohkuma M	Med Mycol J	66	113-123	2025	40887207	10.3314/mmj.24-00031
A25387	JCM 15448T	CRISPR-Cas9 RNP-Mediated Deletion of ERG25 in Non-albicans Candida Species, Including Candida auris.	Okamoto M, Sasamoto K, Takahashi-Nakaguchi A, Zhao F, Yamaguchi M, Chibana H	Med Mycol J	66	35-43	2025	40451886	10.3314/mmj.24-00023
A25388	JCM 14753T	A Comparative Longitudinal Study Analyzing Vaginal Microbiota Differences Between Term and Preterm Pregnancies in Korean Women	Nam G, Lee K A, Kim S J, Oh K Y, Lee S, Lee H C, Kim S Y, Park M H	Medicina	61	752	2025	40283043	10.3390/medicina61040752
A25389	JCM 3699	Structure and Properties of Cellulose Acetate Membranes Modified via Biocidal Compositions Obtained from Forest Chemical Raw Materials.	Hliavitskaya T, Gapan’kova E I, Latyshevich I A, Skakovskii E D, Kauychkina V S, Melnikova G, Turaev K K, Kasimov S, Bildyukevich A V	Membr Membr Technol	7	82-95	2025		10.1134/S2517751625600414
A25390	JCM 7735	A high-throughput and time-efficient Nanopore full-length 16S rRNA gene sequencing protocol for synthetic microbial communities.	Zhou X, Faust K	Methods	240	14-20	2025	40204203	10.1016/j.ymeth.2025.04.003
A25391	JCM 1149T, JCM 1157T, JCM 2257T, JCM 5803T, JCM 5804T, JCM 5885, JCM 6124T	Physicochemical and sensory characterization of functional synbiotic Labneh fortified with the bacteriocin-producing Lactiplantibacillus plantarum strain GA7 and nano-encapsulated Tirmania pinoyi extract.	Daba G M, Elkhateeb W A, Saleh S A A, Soliman T N, El-Dein A N	Microb Cell Fact	24	18	2025	39800683	10.1186/s12934-024-02631-7
A25392		Metabolic engineering and adaptive laboratory evolution of Kluyveromyces Marxianus for lactic acid production.	Smets J, Godoy H E, Goossenaerts J, Bun E V, Deparis Q, Bauwens J, Ortiz-Merino R A, Mancera E, DeLuna A, Verstrepen K J	Microb Cell Fact	24	179	2025	40760443	10.1186/s12934-025-02805-x
A25393	JCM 1192T, JCM 1273, JCM 7017, JCM 7019	Growth-independent CLA production by Bifidobacterium breve JKL2022 and the potential transcriptional regulatory role of TetR in linoleic acid isomerase expression.	Elnar A G, Kim G-B	Microb Cell Fact	24	140	2025	40544262	10.1186/s12934-025-02766-1
B25394	JCM 12662T, JCM 17250T, JCM 18529T, JCM 34140T, JCM 37169	Isolation of a Tissierellaceae Bacterium Exhibiting a High Reduction Potential for Insoluble Indigo Dyes.	Tu Z, Yumoto I	Microbes Environ	40	24104	2025	40653370	10.1264/jsme2.ME24104
C25395	JCM 36253, JCM 36254, JCM 36255, JCM 36256, JCM 37584, JCM 37585, JCM 37586, JCM 37587, JCM 37588, JCM 37589, JCM 37590, JCM 37591	Expanding the Eco-collection of Methane-oxidizing Bacteria Inhabiting Rice Roots: Cultivation, Isolation, and Genomic Characterization of Isolates.	Oe F, Shinjo R, Masuda S, Shibata A, Shirasu K, Hashimoto S, Mitsui H, Sato S, Watanabe T, Asakawa S	Microbes Environ	40	25012	2025	41083357	10.1264/jsme2.ME25012
A25396	JCM 13216T	Nitrogen-fixing Ability of a Thermophilic Sulfate-reducing Bacterium in the Genus Thermodesulfovibrio Isolated from a Terrestrial Hot Spring in Japan.	Hisano T, Nishihara A, Haruta S	Microbes Environ	40	25030	2025	40967806	10.1264/jsme2.ME25030
C25397	JCM 39199	High-pressure Methanogenesis Reveals Metabolic Adaptation to Dissolved CO2 Limitation.	Katayama T, Yoshioka H, Nobu M K	Microbes Environ	40	25066	2025	41391850	10.1264/jsme2.ME25066
A25398	JCM 13470T, JCM 17582T	Coculture of Bifidobacterium bifidum G9-1 With Butyrate-Producing Bacteria Promotes Butyrate Production.	Yokota H, Tanaka Y, Ohno H	Microbiol Immunol	69	389-396	2025	40269463	10.1111/1348-0421.13224
A25399	JCM 1275T	Bifidobacterium bifidum G9-1 Survives in the Intestinal Environment and Influences the Gut Microbiota Despite the Presence of Antimicrobials.	Yokota H, Makizaki Y, Tanaka Y, Ohno H	Microbiol Immunol	69	447-456	2025	40582892	10.1111/1348-0421.13230
A25400	JCM 8532T, JCM 16858T	Closed genome sequence of Fretibacterium fastidiosum, a potential contributor to periodontal disease.	Mori A, Kudoh M, Kuboniwa M, Rückert-Reed C, Busche T, Eisenhut M, Fukusaki E, Bräutigam A, Laker B	Microbiol Resour Announce	14	e0000425	2025	40047508	10.1128/mra.00004-25
A25401	JCM 13997T	The complete genome sequence of the Pediococcus siamensis type strain MCH3-2T (= JCM 13997T = LMG 24279T) Tanasupawat et al. 2007, 1372VP.	Cho G-S, Brinks E, Franz C M A P	Microbiol Resour Announce	14	e0006425	2025	40862359	10.1128/mra.00064-25
A25402	JCM 15949T	Complete genome sequence of Levilactobacillus acidifarinae type strain JCM 15949 (DSM 19394).	Oshiro M, Nakamura K, Sk R, Tashiro Y, Shiwa Y	Microbiol Resour Announce	14	e0037425	2025	40586541	10.1128/mra.00374-25
C25403	JCM 16619, JCM 16657, JCM 16658, JCM 16659, JCM 16660	Complete genome sequences of five Limnohabitans strains isolated from two shallow eutrophic lakes in Japan.	Kurokawa R, Watanabe K, Ogata Y, Takemine S, Takagi M, Shindo C, Suda W	Microbiol Resour Announce	14	e0094425	2025	41159972	10.1128/mra.00944-25
C25404	JCM 37729	Complete genome sequence of Chelatococcus sp. strain KU-N122 (JCM 37729) isolated from a cyclooctanone enrichment culture.	Yamamoto T, Okano K, Iwaki H	Microbiol Resour Announce	14	e0102125	2025	41171057	10.1128/mra.01021-25
C25405	JCM 36557	Draft genome sequence of Solimonas sp. strain SE-A11 isolated from the rhizosphere of feral Brassica napus in South Korea.	Kim J, Nam K-H, Lee J-W, Chun S-J	Microbiol Resour Announce	14	e0105224	2025	39998181	10.1128/mra.01052-24
A25406	JCM 17581T	Complete genome sequence of Roseburia faecis M72/1T.	Murotomi K, Tourlousse D M, Hamajima M, Sekiguchi Y	Microbiol Resour Announce	14	e0125324	2025	39772859	10.1128/mra.01253-24
A25407	JCM 30749T, JCM 35622T, JCM 35623, JCM 35759T	Complete genome sequences of Sellimonas intestinalis JCM 30749T, Sellimonas caecigallum JCM 35759T, and Sellimonas catena JCM 35622T and JCM 35623.	Koike K, Murotomi K, Hamajima M, Tourlousse D M, Hisatomi A, Sakamoto M, Sekiguchi Y	Microbiol Resour Announce	14	e0128224	2025	39998194	10.1128/mra.01282-24
C25408	JCM 33237, JCM 33238, JCM 33243	Draft genomes of six Streptomyces species from a United States biogeography survey.	Hariharan J, Feriancek N M, Doroghazi J R, Choudoir M J, Diebold P, Campbell A N, Panke-Buisse K, Buckley D H	Microbiol Resour Announce	15	e0099625	2025	41358750	10.1128/mra.00996-25
A25409	JCM 1002T, JCM 1012T, JCM 1112T, JCM 1120T, JCM 1131T, JCM 1132T, JCM 1134T, JCM 1136T, JCM 1137, JCM 1149T, JCM 1248T, JCM 2012T, JCM 5805T, JCM 6123T, JCM 6124T, JCM 8130T, JCM 16167T, JCM 17834T	Nicotinamide mononucleotide production by non-recombinant Limosilactobacillus reuteri and nicotinamide adenine dinucleotide synthesizing lactic acid bacteria.	Ozaki S, Honme Y, Morifuji M	Microbiol Spectr	13	e0033325	2025	41114505	10.1128/spectrum.00333-25
C25410	JCM 36295T	Cultivation and metabolic versatility of novel and ubiquitous chemolithoautotrophic Campylobacteria from mangrove sediments.	Cui L, Zhong Y, Li Y, Sievert S M, Huang Z, Wang W, Rubin-Blum M, Cao X, Wang Y, Shao Z, Lai Q, Wang S, Jiang L	Microbiol Spectr	13	e0036725	2025	40698828	10.1128/spectrum.00367-25
C25411	JCM 37538T	Streptomyces huangiella sp. nov., an endophytic actinomycete isolated from Pheretima aspergillum, a promising candidate for biological pathogen control.	Huang D, Tan J, Liao J, Zhu L, Zhang X, Feng D, Liu W, Jin X	Microbiol Spectr	13	e0071725	2025	40960307	10.1128/spectrum.00717-25
A25412	JCM 11811T	Characterization of two novel species of the genus Flagellimonas reveals the key role of vertical inheritance in the evolution of alginate utilization loci.	Yu J, Gao J-W, Cao K, He D-Y, Xu L, Fu G-Y, Sun C	Microbiol Spectr	13	e0091725	2025	40621911	10.1128/spectrum.00917-25
C25413	JCM 34514T	Description of high-altitude, cold-adaptive, metabolically versatile Dyadobacter aurulentus sp. nov. isolated from Western Himalayan farmland soils.	Yadav A, Kirdat K, Thorat V, Tuikhar N, Chundawat K, Lodha T, Tiwarekar B, Patwekar U, Mubarak M, Shastri S, Kumar S, Shouche Y, Goel R	Microbiol Spectr	13	e0114525	2025	41065371	10.1128/spectrum.01145-25
A25414	JCM 15807T	Differential anaerobic oxidation of benzoate in Geotalea daltonii FRC-32.	Kiessling C M, Greenlund S, Bullows J E, Samuels C, Aboderin F, Ramirez N, Chin K-J	Microbiol Spectr	13	e0232424	2025	40042335	10.1128/spectrum.02324-24
A25415	JCM 11413T, JCM 32097T	Identification of Elizabethkingia species by MALDI-TOF MS proteotyping.	Takei S, Teramoto K, Sekiguchi Y, Miida T, Kirikae T, Tada T, Tabe Y	Microbiol Spectr	13	e0245424	2025	39912649	10.1128/spectrum.02454-24
A25416	JCM 12973T	Gut colonization of Bacteroides plebeius suppresses colitis-associated colon cancer development.	Chen H-L, Hu P-Y, Chen C-S, Lin W-H, Hsu D K, Liu F-T, Meng T-C	Microbiol Spectr	13	e0259924	2025	39804065	10.1128/spectrum.02599-24
A25417	JCM 1768T, JCM 2414T, JCM 2415T, JCM 2416T, JCM 2417T, JCM 2420T, JCM 2427T, JCM 5671T, JCM 5674T, JCM 5962T, JCM 6388T, JCM 13569T, JCM 15466T, JCM 31912T	One-step loop-mediated isothermal amplification system for Mycobacterium marinum detection.	Okumura K, Miyamoto Y, Mitarai S, Ato M	Microbiol Spectr	13	e0290624	2025	40497680	10.1128/spectrum.02906-24
A25418	JCM 1043, JCM 1281T, JCM 1283T, JCM 2139T, JCM 7373T, JCM 7375T, JCM 7874T, JCM 8576, JCM 32818T, JCM 32963	Multiplex PCR assay to identify clinically important Aeromonas species.	Sakurai A, Hosokawa N, Ohkushi D, Harada S, Matsumura Y, Itoh N, Ishikawa K, Saito S, Sakurai T, Hase R, Hashimoto T, Doi Y, Suzuki M	Microbiol Spectr	13	e0333124	2025	40202311	10.1128/spectrum.03331-24
C25419	JCM 39189T	Desulfosporosinus shakirovi sp. nov., a Sulfate-Reducing Bacterium Capable of Degrading Petroleum Hydrocarbons.	Eskova A I, Ryzhmanova Y V, Trubitsyn V E, Polonik N S, Ponomareva A L, Shcherbakova V A	Microbiology	94	374–383	2025		10.1134/S0026261724608522
C25420	JCM 39547T	Methanoculleus bovis sp. nov., a New Methane-Producing Hydrogen-Utilizing Archaea from the Rumen of a Cow.	Kataev V, Plotnikov A, Rechkina V, Shcherbakova V, Suzina N, Trubitsyn V, Valyshev A	Microbiology	94	527-539	2025		10.7868/S3034546425060031
C25421	JCM 39547T	Methanoculleus bovis sp. nov., a New Methanogenic Hydrogen-Utilizing Archaeon from the Cow Rumen.	Trubitsyn V E, Rechkina V I, Suzina N E, Plotnikov A O,Valyshev A V, Kataev V Y, Shcherbakova V A	Microbiology	94	902–912	2025		10.1134/S0026261725602076
C25422	JCM 35184T	Isolation and Characterization of Aneurinibacillus baijiui sp. nov., a Novel Bacterial Species from Fermented Grains of Baijiu Capable of Producing Diverse Flavor Compounds.	Zhang R, Li Y M, Gu H Y, Zhang T X, Sun Z B, Pan H X, Ren Q	Microbiology	94	913-921	2025		10.1134/S0026261725601629
C25423	JCM 30229T	Compatible Solutes in the Halotolerant Methylotroph Methylobrevis pamukkalensis PK2T.	But S Y, Rozova O N, Melnikov O, Reshetnikov A S, Chulin A N, Khmelenina V, Doronina N, Mustakhimov I	Microbiology	94	930-939	2025		10.1134/S0026261725602520
C25424	JCM 36210, JCM 36211, JCM 36378	Difficult-to-culture micro-organisms specifically isolated using the liquid-liquid co-culture method – towards the identification of bacterial species and metabolites supporting their growth.	Hisatomi A, Yoshida T, Hasunuma T, Ohkuma M, Sakamoto M	Microbiology	171	1581	2025	40627541	10.1099/mic.0.001581
A25425	JCM 1457T, JCM 1458T, JCM 1462T, JCM 1530T, JCM 1532T, JCM 1599T, JCM 2466T, JCM 2937T, JCM 2938T, JCM 2941T, JCM 2947T, JCM 9195T, JCM 9580T, JCM 9937T, JCM 9939T, JCM 9940T, JCM 9941T, JCM 10018T, JCM 10690T, JCM 10691T, JCM 11166T, JCM 11170T, JCM 11965T, JCM 12878T, JCM 14201T, JCM 31833T	Nuclear division phenotypes in Sporidiobolales and Trichosporonales.	Aoki K, Ohkuma M, Sugita T, Kobayashi Y, Tanaka N, Takashima M	Microbiology Spectrum	13	e0132725	2025	41055366	10.1128/spectrum.01327-25
A25426	JCM 1457T, JCM 1458T, JCM 1462T, JCM 1530T, JCM 1532T, JCM 1599T, JCM 1943T, JCM 2466T, JCM 2937T, JCM 2938T, JCM 2941T, JCM 2947T, JCM 3936T, JCM 6359T, JCM 8357T, JCM 9195T, JCM 9580T, JCM 9886T, JCM 9937T, JCM 9939T, JCM 9940T, JCM 9941T, JCM 10018T, JCM 10690T, JCM 10691T, JCM 11166T, JCM 11170T, JCM 11965T, JCM 12878T, JCM 14201T, JCM 31833T	Analyses of hyphal diversity in Trichosporonales yeasts based on fluorescent microscopic observations.	Aoki K, Ohkuma M, Sugita T, Kobayashi Y, Tanaka N, Takashima M	Microbiology Spectrum	13	e0321024	2025	39998240	10.1128/spectrum.03210-24
A25427	JCM 1002T, JCM 1112T, JCM 1126T, JCM 1149T, JCM 1231T, JCM 2012T, JCM 7177	Milk sialyl-oligosaccharides mediate the early colonization of gut commensal microbes in piglets.	Hashimoto R, Nishiyama K, Namai F, Suzuki K, Sakuma T, Fukuda I, Sugiyama Y, Okano K, Shanoh T, Toyoshi E, Ohgi R, Saha S, Tsuchida S, Nishiyama E, Mukai T, Furukawa M, Nochi T, Villena J, Ikeda-Ohtsubo W, Yoshioka G, Nakazaki E, Suda Y, Kitazawa H	Microbiome	13	135	2025	40413516	10.1186/s40168-025-02129-3
A25428	JCM 1217T, JCM 5826T, JCM 6320T, JCM 31267, JCM 31915T, JCM 33894T	Metabolite-mediated interactions and direct contact between Fusobacterium varium and Faecalibacterium prausnitzii.	Hosomi K, Maruyama S, Matsuoka T, Furuta M, Tojima Y, Uchiyama K, Morita M, Kawashima H, Kobayashi T, Kunisawa J	Microbiome	13	175	2025	40721806	10.1186/s40168-025-02168-w
C25429	JCM 34945T	Analysis of the Genomes and Adaptive Traits of Skermanella cutis sp. nov., a Human Skin Isolate, and the Type Strains Skermanella rosea and Skermanella mucosa.	Choi Y, Ganzorig M, Lee K	Microorganisms	13	94	2025	39858862	10.3390/microorganisms13010094
A25430	JCM 31140T	Isolation and Characterization of Komagataeibacter piraceti sp. nov. and Novacetimonas labruscae sp. nov.: Two Novel Microaerobic Cellulose-Producing Acetic Acid Bacteria from Vinegars.	Karničnik B, Accetto T, Fanedl L, Jugović I, Trček J	Microorganisms	13	456	2025	40005821	10.3390/microorganisms13020456
C25431	JCM 36284T	Bacillus multifaciens sp. nov.+F373, a Crucial and Highly-Active Flavor and Protease Producer Isolated from the qu-Starter of Chinese Wuliangye Baijiu.	Luo Q, Zhao X, Li X, Li Y, Zhao P, Lu Y, Liu D, Su J, Chen J, Zhao D, Li J, Zheng J	Microorganisms	13	993	2025	40431166	10.3390/microorganisms13050993
A25432	JCM 10317T	Moesziomyces antarcticus MMF1 Has a Role in the Secretion of Mannosylerythritol Lipids.	Xu Y, Stuart D T	Microorganisms	13	1463	2025	40731973	10.3390/microorganisms13071463
C25433	JCM 37543T	Characterization of a Novel Lentzea Species Isolated from the Kumtagh Desert and Genomic Insights into the Secondary Metabolite Potential of the Genus.	Wen Y, Li J, Qiao F, Luo W, Chen T, Liu G, Zhang W	Microorganisms	13	1628	2025	40732136	10.3390/microorganisms13071628
A25434	JCM 1254, JCM 31915T	HMOs Induce Butyrate Production of Faecalibacterium prausnitzii via Cross-Feeding by Bifidobacterium bifidum with Different Mechanisms for HMO Types.	Onodera H, Sato Y, Komatsu Y, Yamashita M, Watanabe Y, Kokubo T	Microorganisms	13	1705	2025	40732214	10.3390/microorganisms13071705
A25435	JCM 16147T	Analysis of Genomic and Characterization Features of Microbulbifer weihaiensis sp. nov., Isolated from Coastal Sediment.	Zhang Y-X, Liu A-Q	Microorganisms	13	2005	2025	41011337	10.3390/microorganisms13092005
A25436	JCM 1149T, JCM 1558T, JCM 8115T, JCM 12533T, JCM 16169T	Identification and Characterization of Antiyeast Organic Acids Produced by Lactiplantibacillus plantarum 3121M0s Derived from Mongolian Traditional Fermented Milk, Airag.	Lijon M B, Matsu-Ura Y, Ukita T, Arakawa K, Miyamoto T	Microorganisms	13	2017	2025	41011349	10.3390/microorganisms13092017
C25437	JCM 37671T, JCM 37672T	Neobacillus terrisolis sp. nov. and Neobacillus solisequens sp. nov. Isolated from Soil.	Wu H, Ran C, Zhou N, Zhao X, Liu X, Jiang C, Zhao Y, Lv Y	Microorganisms	13	2437	2025	41304123	10.3390/microorganisms13112437
A25438	JCM 17792T	Youngimonas ophiurae sp. nov., a Quorum-Quenching Marine Bacterium Isolated from a Brittle Star in the South China Sea, and Reclassification of Lutimaribacter litoralis as Youngimonas litoralis comb. nov.	Liu Z, Zhang M, Lai Q, Xu S, Xu Y	Microorganisms	13	2661	2025	41471866	10.3390/microorganisms13122661
A25439	JCM 30274T	Gut-derived Faecalibaculum rodentium exerts anti-cancer effects on colorectal cancer by modulating PDPN-CLEC-2 signaling pathway.	Yang X, Liu M, Wang T, Ma X, Guan Z, Ma B, Duan X, Su C	mSystems	10	e0014825	2025	40693815	10.1128/msystems.00148-25
A25440	JCM 1149T, JCM 1558T	Comparative genome analysis of the immunomodulatory ability of Lactiplantibacillus plantarum and Lactiplantibacillus pentosus from Japanese pickles.	Liu Y, Sawada K, Adachi T, Kino Y, Yin T, Yamamoto N, Yamada T	mSystems	10	e0157524	2025	40298372	10.1128/msystems.01575-24
C25441	JCM 36896T, JCM 36897, JCM 36982T, JCM 36984	Two new arthroconidial yeast species from bark and pit mud in China.	Zhu H-Y, Wei Y-H, Guo L-C, Wen Z, Hu S, Wang D-Q, You X-L, Fan E-D, Yao S-J, Bai F-Y, Han P-J	MycoKeys	113	57-72	2025	39911477	10.3897/mycokeys.113.141799
C25442	JCM 36370T, JCM 36905T, JCM 36906T	Four new species of Pichia (Pichiales, Pichiaceae) isolated from China.	Guo L-C, Hu S, Zhu H-Y, Shang Y-J, Qiu Y-J, Wen Z, Chen S-X, Bai F-Y, Han P-J	MycoKeys	114	115-132	2025	40051986	10.3897/mycokeys.114.142474
C25443	JCM 35729T	Phylogeny and phenotype of Filobasidium revealing three new species (Filobasidiaceae, Filobasidiales) from China.	Chai C-Y, Xi Z-W, Niu Q-H, Hui F-L	MycoKeys	114	49-65	2025	40041797	10.3897/mycokeys.114.142438
C25444	JCM 36172	A new psychrophilic yeast of Kriegeriaceae (Kriegeriales) isolated from lichen in the Arctic, with the description of Lichenia svalbardensis gen. et sp. nov.	Bai Y, Tang Z, Peng X, Huang J, Sun M, Liu J, Peng F	MycoKeys	114	95-113	2025	40041796	10.3897/mycokeys.114.135299
C25445	JCM 10419, JCM 10420	Microbotryozyma lacustris sp. nov. (Basidiomycota, Ustilentylomataceae) and Cyberlindnera basumtsoensis sp. nov. (Ascomycota, Phaffomycetaceae), two novel yeasts isolated from freshwater Lake Basom Tso, China.	Tian L, Phurbu D, Zheng Y-Y	MycoKeys	126	135-150	2025	41446903	10.3897/mycokeys.126.173807
C25446	JCM 37573	Discovery and optimization of a novel halotolerant species of Penicillium from section Citrina and its ligninolytic enzymes.	Yang X, Li J, Meng G, Dai Y, Li Q, Luo C	Mycol Progress	24	49	2025		10.1007/s11557-025-02067-2
C25447	JCM 39527T	Malassezia polysorbatinonusus sp. nov., a Novel Isolate from a Japanese Patient with Seborrheic Dermatitis.	Hiruma J, Nojo H, Hiruma M, Sugita T, Makimura K, Harada K, Kano R	Mycopathologia	190	15	2025	39806192	10.1007/s11046-024-00926-2
A25448	JCM 3388T, JCM 7436T	Simultaneous Detection of Four Madurella Species Using Loop-Mediated Isothermal Amplification (LAMP) for Eumycetoma Diagnosis.	Yoshioka I, Fahal A H, Sow D, Kaneko S, Mori Y, Ban S, Yaguchi T	Mycopathologia	190	105	2025	41152542	10.1007/s11046-025-01019-4
A25449	JCM 10317T	Degradation of biodegradable plastics by phytopathogenic smut fungi.	Aoki Y, Tanaka E	Mycoscience	66	138-144	2025		10.47371/mycosci.2024.12.002
A25450	JCM 12257T	Inhibitory Effect of Oral Care Tablets Containing Three Powdered Phytochemicals on the Proliferation of Porphyromonas gingivalis.	Okamura T, Mori M, Yamaoka C, Kawahara S, Koshino S, Suzuki K, Dateoka S, Nishiura A, Ono Y, Tominaga K	Nano Biomedicine	17	9-13	2025		10.11344/nano.17.9
A25451	JCM 1112T, JCM 1131T, JCM 1134T, JCM 1136T, JCM 1149T, JCM 1192T, JCM 1194T, JCM 1200T, JCM 1205T, JCM 1217T, JCM 1222T, JCM 1255T, JCM 1275T, JCM 1291T, JCM 1298T, JCM 1395, JCM 1397T, JCM 1401T, JCM 2012T, JCM 5705T, JCM 5707T, JCM 5805T, JCM 5824T, JCM 5825T, JCM 5826T, JCM 5827T, JCM 5828T, JCM 6124T, JCM 6421T, JCM 6567T, JCM 9496T, JCM 9497T, JCM 9498T, JCM 10188T, JCM 10261T, JCM 10602T, JCM 13265T, JCM 13406T, JCM 13471T, JCM 14655T, JCM 15631T, JCM 17834T, JCM 30893, JCM 31500T, JCM 33112, JCM 33114T, JCM 33116T	Sucrose-preferring gut microbes prevent host obesity by producing exopolysaccharides.	Shimizu H, Miyamoto J, Hisa K, Ohue-Kitano R, Takada H, Yamano M, Nishida A, Sasahara D, Masujima Y, Watanabe K, Nishikawa S, Takahashi S, Ikeda T, Nakajima Y, Yoshida N, Matsuzaki C, Kageyama T, Hayashi I, Matsuki A, Akashi R, Kitahama S, Ueyama M, Murakami T, Inuki S, Irie J, Satoh-Asahara N, Toju H, Mori H, Nakaoka S, Yamashita T, Toyoda A, Yamamoto K, Ohno H, Katayama T, Itoh H, Kimura I	Nat Commun	16	1145	2025	39880823	10.1038/s41467-025-56470-0
A25452	JCM 9062T	Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA structure.	Yamaura K, Takemata N, Kariya M, Osaka A, Ishino S, Yamauchi M, Tamura T, Hamachi I, Takada S, Ishino Y, Atomi H	Nat Commun	16	1312	2025	39971902	10.1038/s41467-025-56197-y
A25453	JCM 13446T	A lysine-restricted diet ameliorates obesity via enrichment of Parabacteroides goldsteinii and 1,4-methylimidazoleacetic acid.	Zhao F, Zou Z, Liu Z, Wang J, Wu Y, Zhang J, Liu Q, Liang W, Yao J, Jiang X, Routledge M N, Khan A, Zhang H, Qiu J, Chen C	Nat Commun	16	9953	2025	41224764	10.1038/s41467-025-64892-z
C25454	JCM 31252, JCM 31253, JCM 31255, JCM 31257, JCM 31260, JCM 31261, JCM 31262, JCM 31265T, JCM 31267, JCM 31268	HiBC: a publicly available collection of bacterial strains isolated from the human gut.	Hitch T C A, Masson J M, Pauvert C, Bosch J, Nüchtern S, Treichel N S, Baloh M, Razavi S, Afrizal A, Kousetzi N, Aguirre A M, Wylensek D, Coates A C, Jennings S A V, Panyot A, Viehof A, Schmitz M A, Stuhrmann M, Deis E C, Bisdorf K, Chiotelli M D, Lissin A, Schober I, Witte J, Cramer T, Riedel T, Wende M, Winter K A, Amend L, Riva A, Trinh S, Mitchell L, Hartman J, Berry D, Seitz J, Bossert L C, Grognot M, Allers T, Strowig T, Pester M, Abt B, Reimer L C, Overmann	Nat Commun	16	4203	2025	40328737	10.1038/s41467-025-59229-9
A25455	JCM 12489T	Integrative genomic reconstruction reveals heterogeneity in carbohydrate utilization across human gut bifidobacteria	Arzamasov A A, Rodionov D A, Hibberd M C, Guruge J L, Kent J E, Kazanov M D, Leyn S A, Elane M L, Sejane K, Furst A, Bode L, Barratt M J, Gordon J I, Osterman A L	Nat Microbiol	10	2031-2047	2025	40670725	10.1038/s41564-025-02056-x
A25456	JCM 13191T	Carotenoids bind rhodopsins and act as photocycle-accelerating pigments in marine Bacteroidota	Fujiwara T, Hosaka T, Hasegawa-Takano M, Nishimura Y, Tominaga K, Mori K, Nishino S, Takahashi Y, Uchikubo-Kamo T, Hanada K, Maoka T, Takaichi S, Inoue K, Shirouzu M, Yoshizawa S	Nat Microbiol	10	2603-2615	2025	40908369	10.1038/s41564-025-02109-1
A25457	JCM 30894	Microbiota-derived succinate promotes enterohaemorrhagic Escherichia coli virulence via lysine succinylation.	Li L, Liu Y, Liu D, Wang J, Wang M, Xiang B, Qin J, Yao T, Li W, Wu P, Wang Q, Zhang J, Xu Y, Liu M, Wang Y, Ma G, Liu R, Li X, Huai Z, Huang Y, Guo H, Yang B, Feng L, Huang D, Zhang K, Wang L, Liu B	Nat Microbiol	10	749-764	2025	39891012	10.1038/s41564-025-01931-x
A25458	JCM 14654T	Microbiota-driven antitumour immunity mediated by dendritic cell migration.	Lin N Y-T, Fukuoka S, Koyama S, Motooka D, Tourlousse D M, Shigeno Y, Matsumoto Y, Yamano H, Murotomi K, Tamaki H, Irie T, Sugiyama E, Kumagai S, Itahashi K, Tanegashima T, Fujimaki K, Ito S, Shindo M, Tsuji T, Wake H, Watanabe K, Maeda Y, Enokida T, Tahara M, Yamashita R, Fujisawa T, Nomura M, Kawazoe A, Goto K, Doi T, Shitara K, Mano H, Sekiguchi Y, Nakamura S, Benno Y, Nishikawa H	Nature	644	1058-1068	2025	40659786	10.1038/s41586-025-09249-8
A25459	JCM 5826T, JCM 15077T, JCM 16074T, JCM 17568T, JCM 30894	Gut commensals-derived succinate impels colonic inflammation in ulcerative colitis.	Dalal R, Sadhu S, Batra A, Goswami S, Dandotiya J, V V K, Yadav R, Singh V, Chaturvedi K, Kannan R, Kumar S, Kumar Y, Rathore D K, Salunke D B, Ahuja V, Awasthi A	npj Biofilms Microbiomes	11	44	2025	40082467	10.1038/s41522-025-00672-3
A25460	JCM 17463T	A combination of potential psychobiotics alleviates anxiety and depression behaviors induced by chronic unpredictable mild stress.	Meng C, Feng S, Hao Z, Liu H	npj Biofilms Microbiomes	11	147	2025	40738889	10.1038/s41522-025-00779-7
A25461	JCM 21280T	Bacterial hitchhiking with drug-loaded nanoparticles as a drug delivery strategy for cancer immunotherapy.	Paun R A, Dumut D C, Li L, Radzioch D, Tabrizian M	npj Biomed Innov	2	3	2025	42032168	10.1038/s44385-024-00006-6
A25462	JCM 15041T	Co-Fermented Black Barley and Quinoa Alleviate Hepatic Inflammation via Regulating Metabolic Disorders and Gut Microbiota in Mice Fed with High-Fat Diet.	Wei F, Jiang H, Zhu C, Zhong L, Lin Z, Wu Y, Song L	Nutrients	17	3228	2025	41156481	10.3390/nu17203228
A25463	JCM 12990T	Fisetin Inhibits Periodontal Pathogen-Induced EMT in Oral Squamous Cell Carcinoma via the Wnt/β-Catenin Pathway.	Zhang R, Takigawa H, Maruyama H, Nambu T, Mashimo C, Okinaga T	Nutrients	17	3522	2025	41305575	10.3390/nu17223522
A25464	JCM 11494T, JCM 31078T, JCM 31881T	Isolation and structural determination of natural products bearing tetrahydrogenated isoprenoid side-chains at their ω-termini.	Abe T, Katano M, Otsuka I, Wakamatsu N, Takahashi S, Ueda D, Fukuda E, Endo S, Nishikawa K, Yasuno Y, Nakayama A, Shinada T, Sato T	Org Biomol Chem	23	3423-3430	2025	40079055	10.1039/D5OB00160A
C25465	JCM 35796T	Taxonomic identification, genomic analysis, and optimized chromium(VI) bioreduction by Microbacterium triticisoli sp. nov. M28T.	Qing Y, Tian J, Ma Z, Tang M, Long X	PeerJ	13	e20192	2025	41146992	10.7717/peerj.20192
A25466	JCM 30274T	Comparative Analysis of Growth Dynamics and Relative Abundances of Gut Microbiota Influenced by Ketogenic Diet.	Tang M, Zhang Z, Lin L, Niu J, Meng G, Wang W, Wang J, Wang Y	Phenomics	5	65-75	2025	40313600	10.1007/s43657-025-00228-7
A25467	JCM 20922	Omics-based identification of the broader effects of 2-hydroxyisoflavanone synthase gene editing on a gene regulatory network beyond isoflavonoid loss in soybean hairy roots.	Uchida K, Fuji Y, Tabeta H, Akashi T, Hirai M Y	Plant Cell Physiol	66	304-317	2025	39786412	10.1093/pcp/pcae151
C25468	JCM 39088T	Metabolic versatility and nitrate reduction pathways of a new thermophilic bacterium of the Deferrivibrionaceae: Deferrivibrio metallireducens sp. nov isolated from hot sediments of Vulcano Island, Italy.	Galès G, Hennart M, Hannoun M, Postec A, Erauso G	PLoS One	20	e0315093	2025	40067810	10.1371/journal.pone.0315093
A25469	JCM 1652	Synthesis, antibacterial activity, in silico ADMET prediction, docking, and molecular dynamics studies of substituted phenyl and furan ring containing thiazole Schiff base derivatives.	Islam M D, Saha J K, Marufa S S, Kundu T K, Hossain I, Nishino H, Alam M S, Haque M A, Rahman M M	PLoS One	20	e0318999	2025	40063584	10.1371/journal.pone.0318999
C25470	JCM 14066T, JCM 35474T	Genome-based reclassification of the family Stappiaceae and assessment of environmental forcing with the report of two novel taxa, Flexibacterium corallicola gen. nov., sp. nov., and Nesiotobacter zosterae sp. nov., isolated from coral and seagrass.	Park M-J, Kim J, Kim Y J, Yu J, Jin H, Woo S, Zo Y-G, Kwon K K	PLoS One	20	e0322500	2025	40373110	10.1371/journal.pone.0322500
C25471	JCM 36569T	Characterization of Congregicoccus parvus gen. nov., sp. nov., a novel slow-growing ultramicrobacterium of the phylum Verrucomicrobiota.	Islam M S, Yamamoto K, Morita N, Kitagawa W, Yumoto I, Kato S, Nakai R, Igarashi K	PLoS One	20	e0326734	2025	40560993	10.1371/journal.pone.0326734
A25472	JCM 5707T, JCM 13464T, JCM 14723T	Cultivation of Prevotella copri in a medium supplemented with tomato juice suppresses the bacteria-induced intestinal permeability in Caenorhabditis elegans.	Fuke N, Desaka N, Nakazawa Y, Suzuki S, Matsumoto K, Higashimura Y	PLoS One	20	e0331446	2025	40911618	10.1371/journal.pone.0331446
C25473	JCM 37550T	Lacrimispora sanguinis sp. nov., isolated from human blood.	Yu H-J, Cho Y Y, Paek J, Kang M, Ahn M Y, Kim H, Byun J-H, Kim T Y, Huh H J, Bai L, Chang Y-H	PLoS One	20	e0334875	2025	41171937	10.1371/journal.pone.0334875
A25474	JCM 7017	Intravital imaging of translocated bacteria via fluorogenic labeling of gut microbiota in situ.	Fan X, Zhou Y, Bai W, Li X, Lin L, Lin H, Yang M, Yu X, Wang J, Lin L, Wang W	PNAS	122	e2415845122	2025	40153461	10.1073/pnas.2415845122
A25475	JCM 10168, JCM 10169	Polyethylene glycol grafting by thiol-ene reaction for the chemical modification of polyhydroxyalkanoates.	Miyahara Y, Nakagawa A, Nakata Y, Nomura C T,, Tsuge T	Polym Int	74	888-897	2025		10.1002/pi.6747
C25476	JCM 37401	Isolation and characterization of high-HHx PHA degrading bacterium from mangrove ecosystem using an improved PHA-agar plate assay.	Syauqi T A, Ahmad A, Tang H J, Wan J H, Sudesh K	Polymer Degradation and Stability	240	111434	2025		10.1016/j.polymdegradstab.2025.111434
A25477	JCM 18786T	Utilization of wine lees as a substrate for polyhydroxyalkanoates production by employing halophilic and thermophilic bacteria.	Caminiti V, Kourilova X, Slosarova K, Favaro L, Buchtikova I, Sedlacek P, Obruca S, Basaglia M	Polymer Degradation and Stability	241	111524	2025		10.1016/j.polymdegradstab.2025.111524
A25478	JCM 1028, JCM 1044, JCM 1131T, JCM 2012T	EGCG improve meat quality, restore lipid metabolism disorder and regulate intestinal flora in high-fat fed broilers.	Gao L, Liu C, Wu J, Cui Y, Zhang M, Bi C, Shan A, Dou X	Poult Sci	104	104875	2025	39919564	10.1016/j.psj.2025.104875
A25479	JCM 5887T	Nisin A Treatment to Protect Honey Bee Larvae from European Foulbrood Disease.	Nakamura K, Takamatsu D, Harada M, Zendo T, Sekiya Y, Endo A	Probiotics Antimicrob Proteins	17	3587-3594	2025	39812909	10.1007/s12602-025-10450-4
A25480	JCM 1217T	Bifidobacterium longum Ameliorates Intestinal Inflammation and Metabolic Biomarkers in Mice Fed a High-Fat Diet with Gliadin by Indoleacrylic Acid.	Wang N, Pei Z, Wang H, Zhao J, Lu W	Probiotics Antimicrob Proteins	17	3614-3629	2025	39982644	10.1007/s12602-025-10486-6
A25481	JCM 17463T	Anti-inflammatory Effects of Membrane Vesicles from Eubacterium rectale via the NLRP3 Signal Pathway.	Zhang H, Zhao Y, Li D, Li H, Wang Z, Zhang L, Niu H, Huang Y, Zhao C, Jin Y, Zhou D	Probiotics Antimicrob Proteins	17	4841-4850	2025	39702738	10.1007/s12602-024-10432-y
A25482	JCM 20135, JCM 32814T	Effect of Riboflavin and Blue Light-Emitting Diode Irradiation on Microbial Inactivation and the Physicochemical Properties of Betel Leaves.	Rinpan R, Panudta V, Phongkhedkham R, Janpitu S, Phongthai S,Klangpetch W, Khumsap T	Processes	13	3130	2025		10.3390/pr13103130
A25483	JCM 1222T, JCM 1255T, JCM 11125	In Vitro Antagonistic Activity of Probiotic Strains against Antibiotic-Resistant Klebsiella pneumoniae isolated from Preterm Infant Stools.	Thye, A Y -K , Kumari, Y , Chan, K -G , Lee, J K -F , Tan, L T -H , Letchumanan, V , Lee, L -H , & Law, J W -F	Progress In Microbes & Molecular Biology	8	a0000477	2025		10.36877/pmmb.a0000477
A25484	JCM 1157T, JCM 1222T, JCM 1233T, JCM 20131T, JCM 20135	In Vitro Amyloid Formation by a Bacteriocin From Bifidobacterium longum subsp. Infantis.	Kumagai A, Mayanagi K, Hayashi S, Nakano S, Ito S, Fujinami D	Proteins Struct Funct Bioinf	93	1953-1961	2025	40525494	10.1002/prot.70002
A25485	JCM 12513T	Distinct roles of Lactobacillus species in trophoblast invasion: Lactobacillus iners fails to promote HTR-8/SVneo cell invasion unlike Lactobacillus crispatus.	Bae J, Takada K, Takeda Y, Trinh Q D, Komine-Aizawa S, Kim D W, Hayakawa S	Reprod Biol	25	101041	2025	40460761	10.1016/j.repbio.2025.101041
A25486	JCM 9153	Evidence that ribosomal protein bS21 is a component of the OLE ribonucleoprotein complex.	Wencker F D R, Lyon S E, Breaker R R	RNA Biology	22	1-14	2025	40322971	10.1080/15476286.2025.2491842
A25487	JCM 3203T, JCM 3240T, JCM 4073T, JCM 4291T, JCM 4460T, JCM 4963, JCM 7439T, JCM 10675T, JCM 11883T, JCM 12160T, JCM 12396T, JCM 12404T, JCM 12693T, JCM 13017, JCM 13592T, JCM 13857T, JCM 14548T, JCM 21757T, JCM 30727T	Identification of γ-butyrolactone signalling molecules in diverse actinomycetes using resin-assisted isolation and chemoenzymatic synthesis.	Kudo Y, Konoki K, Yotsu-Yamashita M	RSC Chem Biol	6	630-641	2025	40046449	10.1039/D5CB00007F
A25488	JCM 1544	Organoselenium compounds as an enriched source for the discovery of new antimicrobial agents.	Friberg L I M, Kavanagh A, Amado M, Lowe G, Zuegg J, Paula M N , Onawole A, Floyd H E E, Kravchenko A N, Guan D, Elliott A G, Kuchar J, Mohr F, Luzina O, Salakhutdinov N, Volcho K, Farrukh H S U B, Kalsoom U, Saleem R S Z, Blanchfield J, Blaskovich M A T, Hansford K A	RSC Med Chem	16	3213-3228	2025	40352676	10.1039/D4MD00677A
A25489	JCM 6384T	Creation of a macrolide antibiotic against non-tuberculous Mycobacterium using late-stage boron-mediated aglycon delivery.	Isozaki Y, Makikawa T, Kimura K, Nishihara D, Fujino M, Tanaka Y, Hayashi C, Ishizaki Y, Igarashi M, Yokoyama T, Toshima K, Takahashi D	Sci Adv	11	e2352	2025	40043128	10.1126/sciadv.adt2352
A25490	JCM 1465T, JCM 20135	Phage lysis protein LysM acts as a wedge to block MurJ conformational changes.	Kohga H, Lertpreedakorn N, Miyazaki R, Wu S, Hosoda K, Tanaka H, Takahashi Y S, Yoshikaie K, Kuruma Y, Shigematsu H, Mori T, Tsukazaki T	Sci Adv	11	e8083	2025	41061077	10.1126/sciadv.ady8083
A25491	JCM 7783	Invasion of pancreatic ductal epithelial cells by Enterococcus faecalis is mediated by fibronectin and enterococcal fibronectin-binding protein A.	Shimosaka M, Kondo J, Sonoda M, Kawaguchi R, Noda E, Nishikori K, Ogata A, Takamatsu S, Sasai K, Akita H, Eguchi H, Kamada Y, Okamoto S, Miyoshi E	Sci Rep	15	2585	2025	39833342	10.1038/s41598-025-86531-9
C25492	JCM 36544T	Leclercia barmai sp. nov., isolated from worm castings of Eisenia fetida, is a urease-positive, 3-nitropropionic acid and glycerol-consuming bacterium.	Barman P, Sinha S, Chakraborty R	Sci Rep	15	5615	2025	39955304	10.1038/s41598-024-78134-7
A25493	JCM 22674	Misconception of Schizophyllum commune strain 20R-7-F01 origin from subseafloor sediments over 20 million years old.	Boiko S M	Sci Rep	15	6586	2025	39994251	10.1038/s41598-024-84457-2
A25494	JCM 2413	Enhanced peri-implantitis management through purple-LED irradiation coupled with silver ion application and calcium phosphate gene transfection carrier coating.	Iwabuchi T, Tenkumo T, Mokudai T, Takahashi M, Ogawa T, Sasaki K, Yoda N	Sci Rep	15	13759	2025	40258901	10.1038/s41598-025-96075-7
A25495	JCM 1192T, JCM 1273, JCM 7017, JCM 7019	Genomic characterization and probiotic assessment of Bifidobacterium breve JKL2022 with strain-specific CLA-converting properties.	Elnar A G, Eum B, Kim G-B	Sci Rep	15	15419	2025	40316692	10.1038/s41598-025-98770-x
A25496	JCM 1200T, JCM 1217T, JCM 5826T, JCM 13464T, JCM 31267, JCM 31915T, JCM 33894T	Establishment of enterotype-specific antibodies for various diagnostic systems.	Yoshii K, Node E, Furuta M, Tojima Y, Matsunaga A, Adachi J, Takaai N, Morita M, Hosomi K, Kunisawa J	Sci Rep	15	16814	2025	40368953	10.1038/s41598-025-01144-6
B25497	JCM 30613T, JCM 37214T	Novel gut bacteria species Paenibacillus ilasis with phosphorus degrading and soluble starch hydrolysis abilities isolated from fresh feces of rhinoceros.	Li X, Zuo S, Li M, Li Q, Su L	Sci Rep	15	21750	2025	40596264	10.1038/s41598-025-06760-w
A25498	JCM 17869T	Uptake of environmental halophilic archaea by human dendritic cells.	Krawczyk K, Rybaczek D, Locht C, Pyrzanowska-Banasiak A, Ciołek M, Sicinska P, Rachubik M, Kowalewicz-Kulbat M	Sci Rep	15	21912	2025	40593076	10.1038/s41598-025-07365-z
A25499	JCM 1217T	Comprehensive gene expression analysis of organoid-derived healthy human colonic epithelium and cancer cell line stimulated with live probiotic bacteria.	Sen A, Imai A, Miyauchi E, Yanagisawa K, Oda T, Sasaki F, Uchida S, Okada T, Yokobori T, Saeki H, Odamaki T, Sasaki N	Sci Rep	15	22325	2025	40593146	10.1038/s41598-025-07391-x
C25500	JCM 17495	Uptake system of lignin-derived aromatic acids in promising Sphingomonadaceae strains for lignin valorization through biological funneling.	Fujita M, Hirano R, Nagayoshi K, Kamimura N, Masai E	Sci Rep	15	23644	2025	40604037	10.1038/s41598-025-08757-x
A25501	JCM 3175T	Genome-based reclassification of Micromonospora veneta Kaewkla et al. 2022 as a later heterotypic synonym of Micromonospora coerulea Jensen 1932 (Approved lists 1980).	Zhang X, Chen X, Wu X, Liu Y, Wei Y	Sci Rep	15	27420	2025	40721945	10.1038/s41598-025-13676-y
A25502	JCM 12141T, JCM 13574T	Characterization of Mycobacterium antarcticum sp. nov., a psychrotolerant member of the genus Mycobacterium isolated from Antarctic soil.	Shimada S, Aoki K, Shiozawa A, Nakai R, Fujiwara N, Komori K, Kudoh S, Imura S, Ishii Y, Tateda K	Sci Rep	15	34231	2025	41034288	10.1038/s41598-025-16147-6
A25503	JCM 17567T	Real-time PCR assay design and validation for Prevotella bivia, Peptostreptococcus anaerobius, and Dialister micraerophilus, bacteria associated with increased HIV susceptibility.	Nelson S G, Spyers-Duran M, Aziz M, Marcone D, Nault D, Demessie G, Kaul R, Galiwango R M, Yee R, Liu C M	Sci Rep	15	37789	2025	41162450	10.1038/s41598-025-21406-7
A25504	JCM 13865T	Whole mastic resin ameliorates halitosis and gingivitis in dogs and cats infected with Porphyromonas gulae.	Kaneki M, Komai N, Ohira C, Fukuyama T	Sci Rep	15	43332	2025	41360842	10.1038/s41598-025-27244-x
C25505	JCM 32882T, JCM 32884	Thermophilic and mesophilic sulfate reduction by rare biosphere bacteria in acidic metal-bearing mine wastes from the temperate climate zone.	Karnachuk O V, Panova I A, Rusanov I I, Avakyan M R, Lukina A P, Ikkert O P, Kijar N, Kadnikov V V, Beletsky A V, Danilova E V, Kopitsyn D S, Pimenov N V, Shcherbakova V A, Ravin N V	Sci Rep	15	44537	2025	41345487	10.1038/s41598-025-28271-4
A25506	JCM 31474T	An archaeal genetic code with all TAG codons as pyrrolysine.	Kivenson V, Peters S L, Borrel G, Kivenson A, Roe L T, Hamlish N X, Fadhlaoui K, Schepartz A, Gribaldo S, Hettich R L, Banfield J F	Science	390	e2404	2025	41264687	10.1126/science.adu2404
A25507	JCM 10645T	Screening and diagnosis of colorectal cancer using nucleic acid aptamers targeting Solobacterium moorei: Development of electrochemical sensors for clinical application.	Yuan D, Qiu C, Chen H, Liu F, Feng S, Zhang P, Qin Y, Fan T, Chen Y, Jiang Y	Sens Actuators, B	436	137669	2025		10.1016/j.snb.2025.137669
A25508	JCM 9730T	Self-organization of cellulose-producing microbial communities during biofilm spreading.	Laurent J M, Kan A, Steinacher M, Studart A R	Soft Matter	21	8543-8554	2025	41170592	10.1039/D5SM00720H
A25509	JCM 1149T	Study on Intracellular Extracts of Chlorella sp. KLSc61 to Promote Growth of Lactobacillus plantarum JCM 1149.	Khanrin L, Photising P, Phakdeekarngana P, Dejtisakdi W	Suan Sunandha Science and Technology Journal	12	e1022	2025		10.53848/ssstj.v12i1.1022
A25510	JCM 35029T	Genome mining and characterization of a heme-dependent enzyme catalyzing intermolecular Nitrogen–Nitrogen bond formation in hydrazinosuccinic acid biosynthesis.	Shi J, Zhao Z, Yang J, Cheng Z, Li H, Liu Y, Zhao G, Wu M, Du Y-L	Synth Syst Biotechnol	10	1421-1427	2025	40918557	10.1016/j.synbio.2025.08.006
B25511	JCM 18630T, JCM 34653T, JCM 34656T, JCM 34660T, JCM 35566T	Description of Albidovulum litorale sp. nov., Albidovulum marisflavi sp. nov., Albidovulum salinarum sp. nov., and Albidovulum sediminicola sp. nov., and proposal for reclassification of the genus Defluviimonas as a later heterotypic synonym of Albidovulum.	He W, Zhang D-F, Li X-J, Wang H-C, Wang L-Q, Yuan Y	Syst Appl Microbiol	48	126576	2025	39667043	10.1016/j.syapm.2024.126576
B25512	JCM 14584T, JCM 34143T, JCM 34309T, JCM 35075, JCM 36674T	Natronorarus salvus gen. nov., sp. nov., Halalkalicoccus ordinarius sp. nov., and Halalkalicoccus salilacus sp. nov., halophilic archaea from a soda lake and two saline lakes, and proposal to classify the genera Halalkalicoccus and Natronorarus into Halalkalicoccaceae fam. nov. in the order Halobacteriales within the class Halobacteria.	Mao Y-L, Dong X-Y, Tao C-Q, Wu Z-P, Shi X-W, Hou J, Cui H-L	Syst Appl Microbiol	48	126577	2025	39700724	10.1016/j.syapm.2024.126577
B25513	JCM 30036T, JCM 31107T, JCM 35607T, JCM 36493T, JCM 36494T, JCM 36495T	Genome-based taxonomy of the family Haloarculaceae, proposal of Natronomonadaceae fam. nov., and description of four novel halophilic archaea from two saline lakes and a marine solar saltern.	Zhu L-R, Mao Y-L, Hu Y, Sun Y-P, Hou J, Cui H-L	Syst Appl Microbiol	48	126592	2025	40036997	10.1016/j.syapm.2025.126592
C25514	JCM 35977T	Thiohalorhabdus methylotropha sp. nov., an extremely halophilic autotrophic methylotiotroph from hypersaline lakes.	Sorokin D Y, Merkel A Y, Gebbie W, Kalyuzhnaya M G	Syst Appl Microbiol	48	126602	2025	40101460	10.1016/j.syapm.2025.126602
C25515	JCM 31828T, JCM 31829T, JCM 31830T	Comparative genomics of Elusimicrobiaceae (phylum Elusimicrobiota) and description of the isolates Elusimicrobium simillimum sp. nov., Elusimicrobium posterum sp. nov., and Parelusimicrobium proximum gen. nov. sp. nov.	Mies U S, Zheng H, Platt K, Radek R, Paczia N, Treitli S C, Brune A	Syst Appl Microbiol	48	126606	2025	40273542	10.1016/j.syapm.2025.126606
C25516	JCM 31897T	Representatives of the Synergistaceae family, taxonomic description and genome sequence of Caenicola nitritireducens gen nov., sp. nov., a novel fermenting and amino-acid degrading bacterium isolated from a municipal anaerobic digester sludge.	Houari A E, Ranchou-Peyruse M, Carlier E, Ranchou-Peyruse A, Hirschler-Réa A, Bennisse R, Bouterfas R, McDonald J E, Guyoneaud R, Qatibi A-I	Syst Appl Microbiol	48	126607	2025	40288042	10.1016/j.syapm.2025.126607
C25517	JCM 35885T, JCM 36652T	Rhizobium binxianense sp. nov. and Rhizobium mulingense sp. nov., isolated from nodules of Phaseolus vulgaris in Heilongjiang Province of China.	Liu Y, Liu L, Wang Z, Huang X, Dong Y, Hu D, Gu C, Wang E T, Wang H	Syst Appl Microbiol	48	126619	2025	40435679	10.1016/j.syapm.2025.126619
C25518	JCM 39467T	Magnetovirga frankeli gen. Nov., sp. nov., a magnetotactic bacterium isolated from the Salton Sea, California, that represents a novel lineage in the Gammaprotoeobacteria.	Sirinelli-Kojadinovic M, Turrini E C A, Ropion E, Alonso B, Bergot M, Gachon E, Ortet P, Soto-Rodriguez P E D, Monteil C L, Lefevre C T	Syst Appl Microbiol	48	126621	2025	40441016	10.1016/j.syapm.2025.126621
C25519	JCM 35574T, JCM 35575T	Characterization of Sphingomicrobium aquimarinum sp. nov. and Sphingomicrobium maritimum sp. nov. highlights astaxanthin-producing bacteria in the family Sphingomonadaceae.	Zhang D-F, Wang H-C, Shi S, Li T-P, Guo D-Y, Yang Z-W, Yuan Y, Huang J, Li W-J	Syst Appl Microbiol	48	126624	2025	40482425	10.1016/j.syapm.2025.126624
C25520	JCM 11222T, JCM 30072T, JCM 30833T, JCM 32474T, JCM 34159T, JCM 34315T, JCM 34482T, JCM 37151T, JCM 37371T	Halosimplex amylolyticum sp. nov., Halosimplex halobium sp. nov., Halosimplex marinum sp. nov., Halosimplex rarum sp. nov., Halovenus amylolytica sp. nov., Halovenus halobia sp. nov., and Halovenus marina sp. nov., halophilic archaea isolated from a marine tidal flat, a marine solar saltern, three coarse sea salts, and two saline lakes.	Mao Y-L, Tan S, Wang B-B, Yang X-Y, Hou J, Cui H-L	Syst Appl Microbiol	48	126626	2025	40482427	10.1016/j.syapm.2025.126626
A25521	JCM 17351T	Polyphasic taxonomic description of Streptomyces tritrimontium sp. nov., actinomycetes isolated from moonmilk in Szczelina Chochołowska cave of Tatra Mountains in Poland and emended descriptions of Streptomyces manipurensis Nimaichand et al. 2021 and Streptomyces nojiriensis Ishida et al. 1967.	Bielańska P, Golińska P, Romines E, Rąbalski , Węgrzyn G	Syst Appl Microbiol	48	126627	2025	40517448	10.1016/j.syapm.2025.126627
C25522	JCM 33569T, JCM 35475T	Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs.	Palmer M, Nou N O, Turello L A, Power C E, Ong J C, Covington J K, Lai D, Mayali X, Reysenbach A-L, Qi Y-L, Dodsworth J A, Jiao J-Y, Liu L, Lian Z-H, Li M-M, Liu Y, Murali R, Briggs B R, Zuo H, Quake S R, Eloe-Fadrosh E A, Woyke T, Weber P K, Dong H, Li W-J, Hua Z-S, Hedlund B P	Syst Appl Microbiol	48	126644	2025	40752467	10.1016/j.syapm.2025.126644
C25523	JCM 35976T	Natronocytophaga cellulosiphila, gen. nov., sp. nov., and Marinimicrobium hydrolyticum sp. nov., aerobic haloalkaliphilic bacteria of a cellulose-mineralizing consortium from soda lakes.	Sorokin D Y, Merkel A Y, Khizhniak T V	Syst Appl Microbiol	48	126652	2025	40945165	10.1016/j.syapm.2025.126652
A25524	JCM 18290T	Quyinboa mangrovi gen. nov., sp. nov., Quyinboa ferrireducens sp. nov., and Quyinboa sediminis sp. nov., three novel Fe(III)-reducing and nitrogen-fixing bacteria isolated from mangrove sediment, and the proposal of Quyinboaceae fam. nov. within the class Bacteroidia.	Song X-X, Liu L, Chen G-J, Xu Z, Du Z-J	Syst Appl Microbiol	48	126668	2025	41205487	10.1016/j.syapm.2025.126668
A25525	JCM 15807T	Role of sigma 54 and bamVW in regulation of anaerobic aromatic degradation via benzoate-CoA ligase by Geotalea daltonii.	Kiessling C M, Bullows J E, Ramirez N, Li X, Chin K-J	The Microbe	9	100601	2025		10.1016/j.microb.2025.100601
A25526	JCM 2413	Peritoneal Lavage With Low GDP Neutral pH PD Solution Reduces Mortality and Severity in a Lethal Peritonitis Model.	Ikeda M, Haruhara K, Maruyama Y, Tanaka N, Kusanagi R, Sakamaki Y, Hagiwara H, Yokoo T	Ther Apher Dial	29	752-759	2025	40633943	10.1111/1744-9987.70061
A25527	JCM 11942T, JCM 14769T, JCM 17445T	Transfusion-transmitted bacterial infection risk due to the proliferation of psychrotrophic bacterial species in RBCs and their difficulty in detection.	Kozakai M, Nagumo H, Furuta R A, Matsubayashi K, Satake M, Tani Y	Transfusion	65	297-309	2025	39780513	10.1111/trf.18127
A25528	JCM 2423T	Erythritol alters the expression of genes related to sugar and arginine metabolisms and suppresses the growth of Staphylococcus hyicus.	Onishi-Sakamoto S, Watanabe K, Fujii T, Yamamoto K, Makida R, Tochio T, Nishifuji K	Vet Dermatol	36	494-505	2025	40525604	10.1111/vde.13364
A25529	JCM 13865T	Bactericidal and Anti-Inflammatory Effects of Ashitaba-Extract Ameliorate the Gingivitis and Halitosis in Dogs with Porphyromonas gulae-Infected Periodontal Disease.	Miyamoto T, Shirahata S, Komuro M, Kaneki M, Ohira C, Fukuyama T	Vet Sci	12	981	2025	41150121	10.3390/vetsci12100981
A25530	JCM 1050	Fermented black soldier fly larvae as a sustainable replacement for marine fish in Asian swamp eel diets.	Xiang Y, Gao S, Luo Y, Tang G, Zou X, Xie K, Niu W, Li X, Xiang J, Zhang L, Tan Z, Zeng X, Wang B	Veterinary World	18	1002-1013	2025	40453945	10.14202/vetworld.2025.1002-1013
A25531	JCM 8532T	Development of Chimera AMP–Endolysin with Wider Spectra Against Gram-Negative Bacteria Using High-Throughput Assay.	Kogawa M, Yoda T, Matsuhashi A, Matsushita A, Otsuka Y, Shibagaki S, Hosokawa M, Tsuda S	Viruses	17	200	2025	40006955	10.3390/v17020200
A25532	JCM 1255T, JCM 1298T, JCM 1395, JCM 5707T, JCM 5803T, JCM 5828T, JCM 9979T, JCM 17834T	Quantification of Streptococcus salivarius using the digital polymerase chain reaction as a liver fibrosis marker.	Iwasaki S, Také A, Uojima H, Horio K, Sakaguchi Y, Gotoh K, Satoh T, Hidaka H, Tanaka Y, Hayashi S, Kusano C	World J Hepatol	17	102027	2025	40308822	10.4254/wjh.v17.i4.102027
C25533	JCM 37745	Production of lipase and extracellular polymeric substances by the lipid-degrading bacterium Burkholderia arboris strain JYK2 in response to different substrates.	Huang J, Chien M-F, Bacosa H P, Inoue C	World J Microbiol Biotechnol	41	198	2025	40504329	10.1007/s11274-025-04432-5
A25534	JCM 12577T	Role of organic acid-degrading bacteria in a microbial methanation system using a subterranean microbial community.	Kawano M, Ikeura K, Taniguchi H, Terao M, Ichikawa K, Higashi T, Futamata H, Kimura H	World J Microbiol Biotechnol	41	286	2025	40719846	10.1007/s11274-025-04496-3