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RIKEN BioResource Research Center - Japan Collection of Microorganisms
JCM Mail News (2022.01.25)
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RIKEN BioResource Research Center - Japan Collection of Microorganisms
(JCM) is pleased to update you with the latest information.
======= Contents =====================================================
- Special topic: A novel, ectosymbiotic archaeal strain representing
the DPANN group is now released.
- Newly cataloged strains (2020.11.01 - 2021.12.31)
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Special topic: A novel, ectosymbiotic archaeal strain representing
the DPANN group is now released.
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The DPANN group is a huge, archaeal monophyletic clade including
several phyla known as Diapherotrites, Parvarchaeota, Aenigmarchaeota,
Nanoarchaeota and Nanohaloarchaeota. Most of them have small genomes,
and they are considered to be ectosymbiotic with other archaeal host
species. The most prominent example should be 'Nanoarchaeum equitans'
discovered in 2002, which shows the symbiotic lifestyle with a
hyperthermophilic Crenarchaeota species Ignicoccus hospitalis as the
host species. Since then, several enrichment cultures of the DPANN
group with their archaeal hosts have been reported, such as
'Mancarchaeum acidiphilum' co-cultured with a Thermoplasmata archaeon
and 'Nanohaloarchaeum antarcticus' with a Halobacteria archaeon, to
name a few. Nevertheless, none of them have been released in the
community from culture collections, and had standing in nomenclature.
In a recent publication, Dr. Sakai and his colleagues have uncovered
establishment of the co-culture system that constituted of
'Microcaldus variisymbioticus' (representing the phylum Microcaldota,
formerly known as Micrachaeota) ARM-1 and a strain of Metallosphaera
sp. as a host archaeon from an acidic, terrestrial hot spring. This
ectosymbiotic archaeal strain is now available from JCM (JCM 33787) as
in the co-culture system. It is expected that the strain would
represent a pivotal model to understand the symbiotic lifestyle of the
DPANN group archaea and their evolution.
Reference
Sakai HD et al. 2022. Insight into the symbiotic lifestyle of DPANN
archaea revealed by cultivation and genome analyses.
Proc. Natl. Acad. Sci. USA 119 (3) e2115449119
https://doi.org/10.1073/pnas.2115449119
Takashi Itoh Ph. D./Shingo Kato Ph. D.
Curators (Archaea and bacterial extremophiles)
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Newly cataloged strains (2020.11.01 - 2021.12.31)
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Bacteria
Acidiluteibacter ferrifornacis JCM 33804 Type strain
Acidithiobacillus ferrooxidans JCM 39165
Acidomonas methanolica JCM 25089
Acidomonas methanolica JCM 25090
Acidomonas methanolica JCM 25091
Acidomonas methanolica JCM 25092
Acidomonas methanolica JCM 25093
Acidomonas methanolica JCM 25094
Acidomonas methanolica JCM 25095
Acidomonas methanolica JCM 25096
Acidomonas methanolica JCM 25097
Acidomonas methanolica JCM 25098
Acinetobacter chengduensis JCM 33509 Type strain
Acinetobacter kanungonis JCM 34131 Type strain
Acinetobacter lanii JCM 33607 Type strain
"Acinetobacter mesopotamicus" JCM 31073 Proposed type strain
"Acinetobacter pullicarnis" JCM 33150 Proposed type strain
"Acinetobacter pullorum" JCM 33942 Proposed type strain
Acinetobacter shaoyimingii JCM 33608 Type strain
Acinetobacter sp. JCM 17470
Acinetobacter sp. JCM 17878
Acinetobacter sp. JCM 17881
Acinetobacter sp. JCM 17882
Acinetobacter wanghuae JCM 33592 Type strain
Actinobacillus pleuropneumoniae JCM 34732
Actinomadura decatromicini JCM 16996 Type strain
Actinomadura litoris JCM 33456 Type strain
Actinomadura rubrisoli JCM 33875 Type strain
Actinomyces faecalis JCM 34355 Type strain
Actinomyces marmotae JCM 34091 Type strain
Actinomyces procaprae JCM 33484 Type strain
Actinomyces respiraculi JCM 34356 Type strain
Actinomyces trachealis JCM 34357 Type strain
Actinoplanes lichenicola JCM 33066 Type strain
Actinoplanes ovalisporus JCM 33067 Type strain
"Actinoplanes solisilvae" JCM 32512 Proposed type strain
Adlercreutzia equolifaciens subsp. JCM 34756
equolifaciens
Adlercreutzia hattorii JCM 34083 Type strain
Adlercreutzia rubneri JCM 34176 Type strain
"Aedoeadaptatus acetigenes" JCM 34812 Proposed type strain
Aequorivita sinensis JCM 19789 Type strain
Aeromicrobium terrae JCM 33499 Type strain
"Agathobaculum ammoniilyticum" JCM 34985 Proposed type strain
Agromyces mariniharenae JCM 32546 Type strain
"Albitalea terrae" JCM 32971 Proposed type strain
Algibacter sp. JCM 17862
Alistipes indistinctus JCM 15916
Alistipes indistinctus JCM 34084
"Alitiscatomonas aceti" JCM 34810 Proposed type strain
Alkalicella caledoniensis JCM 30958 Type strain
"Alkaliphilus pronyensis" JCM 30644 Proposed type strain
"Alkaliphilus serpentinus" JCM 30643 Proposed type strain
Amaricoccus solimangrovi JCM 33334 Type strain
Amycolatopsis dendrobii JCM 33742 Type strain
Anaerococcus porci JCM 34364 Type strain
"Anaerostipes amylophilus" JCM 34801 Proposed type strain
Anaerostipes hadrus JCM 17467 Type strain
Anaerostipes hadrus JCM 17764
Anaerostipes hominis JCM 32275 Type strain
Anaerovibrio slackiae JCM 34377 Type strain
"Ancyclomarina euxinus" JCM 32614 Proposed type strain
"Anthropogastromicrobium aceti" JCM 34994 Proposed type strain
Apilactobacillus nanyangensis JCM 33867 Type strain
Aquabacterium soli JCM 33106 Type strain
Aquiluna borgnonia JCM 32974 Type strain
Aquincola sp. JCM 18044
Arcobacter parvus JCM 31548 Type strain
Arenibacter amylolyticus JCM 19206 Type strain
"Arthrobacter crusticola" JCM 33723 Proposed type strain
Arthrobacter mobilis JCM 33392 Type strain
Arthrobacter terricola JCM 33641 Type strain
Arthrobacter yangruifuii JCM 33491 Type strain
Arthrobacter zhaoguopingii JCM 33841 Type strain
Asaia bogorensis JCM 25099
Asaia bogorensis JCM 25100
Asaia bogorensis JCM 25101
Asaia bogorensis JCM 25102
Asaia bogorensis JCM 25103
Asaia bogorensis JCM 25104
Asaia siamensis JCM 25105
Asaia siamensis JCM 25106
Asaia siamensis JCM 25107
Aurantiacibacter rhizosphaerae JCM 32444 Type strain
Azoarcus nasutitermitis JCM 32001 Type strain
Azoarcus rhizosphaerae JCM 32002 Type strain
Bacillus aquiflavi JCM 33700
Bacillus aquiflavi JCM 33701
Bacillus aquiflavi JCM 33702
Bacillus aquiflavi JCM 33703 Type strain
Bacillus harenae JCM 32794 Type strain
Bacillus hominis JCM 34125 Type strain
Bacillus paramobilis JCM 34124 Type strain
Bacillus sanguinis JCM 34122 Type strain
"Bacillus telluris" JCM 33017 Proposed type strain
Bacteroides luhongzhouii JCM 33480 Type strain
Bacteroides sp. JCM 19280
Bacteroides zhangwenhongii JCM 33481 Type strain
Baileyella intestinalis JCM 34418 Type strain
"Barnesiella propionica" JCM 34805 Proposed type strain
Bartonella sp. JCM 17710
Bartonella sp. JCM 17711
Bartonella sp. JCM 17716
Bartonella sp. JCM 17717
Berryella intestinalis JCM 34389 Type strain
"Bifidobacterium apousia" JCM 34587 Proposed type strain
"Bifidobacterium choladohabitans" JCM 34586 Proposed type strain
Bifidobacterium choloepi JCM 34854 Type strain
Bifidobacterium merycicum JCM 34115
"Bifidobacterium polysaccharolyticum" JCM 34588 Proposed type strain
Bifidobacterium pseudolongum JCM 31572
Bifidobacterium pseudolongum JCM 31573
Bifidobacterium pseudolongum JCM 31574
Bifidobacterium pseudolongum JCM 31575
Bifidobacterium pseudolongum JCM 31576
Bifidobacterium pseudolongum JCM 31577
Bifidobacterium pseudolongum JCM 31578
Bifidobacterium pseudolongum subsp. JCM 34113
globosum
Bifidobacterium ruminantium JCM 34114
Bilifractor porci JCM 34419 Type strain
"Blautia acetigignens" JCM 34803 Proposed type strain
"Blautia ammoniilytica" JCM 34802 Proposed type strain
Blautia caecimuris JCM 34498 Type strain
Blautia faecicola JCM 34499 Type strain
Blautia liquoris JCM 34225 Type strain
Bombilactobacillus apium JCM 34006 Type strain
Brachybacterium halotolerans JCM 34339 Type strain
Brevibacterium profundi JCM 33845 Type strain
Brevilactibacter coleopterorum JCM 33680 Type strain
"Brotolimicola acetigignens" JCM 34986
"Brotolimicola acetigignens" JCM 34988 Proposed type strain
"Brotonthovivens ammoniilytica" JCM 34815 Proposed type strain
Bullifex porci JCM 34393 Type strain
Bythopirellula goksoeyrii JCM 19442 Type strain
Caldichromatium japonicum JCM 39101 Type strain
Capillibacterium thermochitinicola JCM 33882 Type strain
Capnocytophaga periodontitidis JCM 34126 Type strain
Capnocytophaga periodontitidis JCM 34128
Cerasibacillus terrae JCM 33498 Type strain
Chitinimonas arctica JCM 34323 Type strain
Chitinimonas sp. JCM 17894
Chitiniphilus eburneus JCM 34322 Type strain
Chitinophaga silvatica JCM 32696 Type strain
Chitinophaga solisilvae JCM 33276
Chitinophaga sp. JCM 17663
Chitinophaga sp. JCM 18273
Chromobacterium paludis JCM 33770 Type strain
Chryseobacterium endalhagicum JCM 34506 Type strain
Chryseobacterium salivictor JCM 33980 Type strain
Chryseobacterium sp. JCM 18192
Chryseobacterium vaccae JCM 33749 Type strain
Chryseoglobus indicus JCM 33842 Type strain
"Clostridium ammoniilyticum" JCM 34989
"Clostridium ammoniilyticum" JCM 34990
"Clostridium ammoniilyticum" JCM 34991 Proposed type strain
Clostridium fessum JCM 32258 Type strain
Clostridium porci JCM 34385 Type strain
Clostridium prolinivorans JCM 33161 Type strain
Clostridium sp. JCM 18678
Clostridium sp. JCM 18679
Comamonas suwonensis JCM 34179 Type strain
Companilactobacillus pabuli JCM 34088 Type strain
Companilactobacillus suantsaicola JCM 34855 Type strain
Coprobacter fastidiosus JCM 33896 Type strain
Coprobacter secundus subsp. secundus JCM 33897 Type strain
Coprobacter secundus subsp. secundus JCM 33965
Coprobacter secundus subsp. similis JCM 34079 Type strain
Coprobacter secundus subsp. similis JCM 34080
"Coprococcus ammoniilyticus" JCM 34806 Proposed type strain
Corynebacterium lizhenjunii JCM 34341 Type strain
Corynebacterium lujinxingii JCM 34094 Type strain
Corynebacterium qintianiae JCM 34340 Type strain
Corynebacterium wankanglinii JCM 34398 Type strain
Corynebacterium zhongnanshanii JCM 34106 Type strain
Cupriavidus cauae JCM 34261 Type strain
Cutibacterium porci JCM 34386 Type strain
Cyclobacterium sp. JCM 17631
Dactylosporangium sp. JCM 34239
Deinococcus detaillensis JCM 33291 Type strain
Delftia sp. JCM 18017
Desulfovibrio porci JCM 34370 Type strain
Devosia beringensis JCM 33772 Type strain
Devosia faecipullorum JCM 34167 Type strain
"Dorea acetigenes" JCM 34809 Proposed type strain
"Dorea ammoniilytica" JCM 34808 Proposed type strain
"Dorea amylophila" JCM 34807 Proposed type strain
"Dyadobacter luteus" JCM 32940 Proposed type strain
Eggerthella guodeyinii JCM 33773 Type strain
Eikenella halliae JCM 34133 Type strain
Eikenella longinqua JCM 34134 Type strain
Eisenbergiella porci JCM 34365 Type strain
Elizabethkingia argenteiflava JCM 32097 Type strain
Enorma shizhengliae JCM 33601 Type strain
Enterobacter quasimori JCM 33940 Type strain
Enterovibrio pacificus JCM 17855 Type strain
Erythrobacter sp. JCM 18209
Erythrobacter sp. JCM 18380
Escherichia coli JCM 17474
Escherichia coli JCM 17475
Eubacterium sp. JCM 18683
Faecalibacterium butyricigenerans JCM 39212 Type strain
Faecalibacterium longum JCM 39211 Type strain
Faecalibacterium prausnitzii JCM 39207
Faecalibacterium prausnitzii JCM 39208
Faecalibacterium prausnitzii JCM 39209
Faecalibacterium prausnitzii JCM 39210
Faecalibacterium sp. JCM 17207
"Faecalicatena acetigenes" JCM 34816 Proposed type strain
Ferrimonas lipolytica JCM 33793 Type strain
Ferrimonas sediminum JCM 17552 Type strain
"Flaviaesturariibacter flavus" JCM 33179 Proposed type strain
Flaviflexus ciconiae JCM 33282 Type strain
Flavihumibacter profundi JCM 32675 Type strain
Flavihumibacter soli JCM 33473 Type strain
Flavisolibacter sp. JCM 18196
Flavobacterium bernardetii JCM 34204 Type strain
Flavobacterium dauae JCM 34025 Type strain
Flavobacterium Kayseriense JCM 34195 Type strain
Flavobacterium microcysteis JCM 33501 Type strain
Flavobacterium muglaense JCM 34196 Type strain
Flavobacterium nackdongense JCM 32765 Type strain
Flavobacterium phycosphaerae JCM 33879 Type strain
Flavobacterium silvaticum JCM 31545 Type strain
Flavobacterium solisilvae JCM 31544 Type strain
Flavobacterium sp. JCM 17516
Flavobacterium sp. JCM 17920
Flavobacterium sp. JCM 17921
Flavobacterium sp. JCM 17922
Flavobacterium sp. JCM 18276
Flavobacterium sp. JCM 18277
Flavobacterium sp. JCM 18278
Flavobacterium sp. JCM 18279
Flavobacterium sp. JCM 18280
Flavobacterium supellecticarium JCM 32838 Type strain
Flavobacterium turcicum JCM 34202 Type strain
Floccifex porci JCM 34421 Type strain
Fluviibacter phosphoraccumulans JCM 32071 Type strain
Fluviibacter phosphoraccumulans JCM 33382
Fluviibacter phosphoraccumulans JCM 33383
Fluviispira sanaruensis JCM 31447 Type strain
Formosa sp. JCM 18091
Frischella japonica JCM 34075 Type strain
Fulvimonas sp. JCM 17667
Gaetbulibacter sp. JCM 17732
Gallalistipes aquisgranensis JCM 34649 Type strain
Gallibacter intestinalis JCM 34592 Type strain
"Gallintestinimicrobium propionicum" JCM 34984 Proposed type strain
Gemmiger gallinarum JCM 34595 Type strain
Gemmobacter aestuarii JCM 19754 Type strain
"Georgenia faecalis" JCM 33470 Proposed type strain
Geothermobacter hydrogeniphilus JCM 32109 Type strain
Glaciecola sp. JCM 17605
Gluconobacter frateurii JCM 25109
Gluconobacter frateurii JCM 25110
Gluconobacter frateurii JCM 25111
Gluconobacter frateurii JCM 25112
Gordonia jinghuaiqii JCM 33890 Type strain
Gordonia zhaorongruii JCM 33466 Type strain
Gracilibacillus oryzae JCM 33537 Type strain
Gramella bathymodioli JCM 33424 Type strain
Halarcobacter sp. JCM 17856
Haliea sp. JCM 17446
Haliea sp. JCM 17447
Hallerella porci JCM 34277 Type strain
Hallerella succinigenes JCM 34256 Type strain
Haloactinobacterium kanbiaonis JCM 33464 Type strain
Halobacillus fulvus JCM 32624 Type strain
Halomonas flava JCM 17429 Type strain
Halomonas icarae JCM 33602 Type strain
Halovulum marinum JCM 32611 Type strain
Hansschlegelia quercus JCM 33463 Type strain
Helicobacter delphinicola JCM 32789 Type strain
Helicobacter delphinicola JCM 32790
Helicobacter delphinicola JCM 32791
Helicobacter delphinicola JCM 32792
Holdemanella porci JCM 34391 Type strain
"Hominimerdicola aceti" JCM 34818 Proposed type strain
"Hoministercoradaptatus JCM 34804 Proposed type strain
ammoniilyticus"
"Hoministercoradaptatus JCM 34987
ammoniilyticus"
Hornefia butyriciproducens JCM 34390 Type strain
Hornefia porci JCM 34388 Type strain
"Huintestinicola butyrica" JCM 34817 Proposed type strain
Hydrogenimonas urashimensis JCM 19825 Type strain
Hylemonella gracilis JCM 17153
Hylemonella gracilis JCM 17154
Hylemonella gracilis JCM 17155
Hylemonella gracilis JCM 17156
Hylemonella gracilis JCM 17157
Hylemonella gracilis JCM 17192
Hymenobacter baengnokdamensis JCM 33837 Type strain
"Hymenobacter lutimineralis" JCM 33444 Proposed type strain
Inconstantimicrobium porci JCM 34424 Type strain
Insectihabitans xujianqingii JCM 33490 Type strain
"Iodidimonas gelatinilytica" JCM 17844 Proposed type strain
"Iodidimonas gelatinilytica" JCM 17845
Janthinobacterium aquaticum JCM 34173 Type strain
Janthinobacterium rivuli JCM 34174 Type strain
Janthinobacterium violaceinigrum JCM 34175 Type strain
Jiella pacifica JCM 33903 Type strain
Jinshanibacter zhutongyuii JCM 33489 Type strain
Kaustia mangrovi JCM 33619 Type strain
Kluyvera sichuanensis JCM 34132 Type strain
"Koleobacter methoxysyntrophicus" JCM 39120 Proposed type strain
Komagataeibacter saccharivorans JCM 25288
Kordia sp. JCM 17733
Kozakia baliensis JCM 25123
Kozakia baliensis JCM 25124
Kozakia baliensis JCM 25125
Labilibacter sediminis JCM 33138 Type strain
"Labilibaculum euxinus" JCM 32481 Proposed type strain
Lacisediminihabitans profunda JCM 32673 Type strain
Lacticaseibacillus absianus JCM 33998 Type strain
Lacticaseibacillus mingshuiensis JCM 33567 Type strain
Lacticaseibacillus suilingensis JCM 34362
Lacticaseibacillus suilingensis JCM 34363 Type strain
Lactobacillus corticis JCM 32597 Type strain
Lactobacillus nasalidis JCM 33769 Type strain
"Laedolimicola ammoniilytica" JCM 34983 Proposed type strain
Latilactobacillus curvatus JCM 34776
Lentibacillus cibarius JCM 33390 Type strain
Lentibacillus cibarius JCM 33391
Lentilactobacillus fungorum JCM 32598 Type strain
Lentilactobacillus kribbianus JCM 33997 Type strain
Lentzea alba JCM 33970 Type strain
"Lentzea indica" JCM 33729 Proposed type strain
Leptospira kobayashii JCM 32517 Type strain
Leucobacter chromiisoli JCM 34359 Type strain
Leuconostoc litchii JCM 34853 Type strain
Levilactobacillus andaensis JCM 33863 Type strain
Levilactobacillus brevis JCM 34252
Levilactobacillus lanxiensis JCM 33565 Type strain
Levilactobacillus suantsaiihabitans JCM 34856 Type strain
Levilactobacillus wangkuiensis JCM 33564 Type strain
Lichenicola cladoniae JCM 33603
Lichenicola cladoniae JCM 33604 Type strain
Longicatena caecimuris JCM 34670
Lujinxingia litoralis JCM 33218 Type strain
"Lujinxingia vulgaris" JCM 33217 Proposed type strain
"Luteimonas granuli" JCM 18203 Proposed type strain
Lutibacter sp. JCM 17734
Lysobacter sp. JCM 18051
Lysobacter sp. JCM 18137
Mangrovivirga cuniculi JCM 33609 Type strain
Maribacter sp. JCM 17791
Maribrevibacterium harenarium JCM 33332 Type strain
Mariniflexile maritimum JCM 33982 Type strain
Marinobacter halodurans JCM 33109 Type strain
Marisediminicola senii JCM 33936 Type strain
Massilia sp. JCM 17963
Massilia yuzhufengensis JCM 18139 Type strain
Megamonas funiformis JCM 34757
"Megasphaera butyrica" JCM 34811 Proposed type strain
Mesorhizobium microcysteis JCM 33503 Type strain
Mesorhizobium terrae JCM 33432 Type strain
Methylobacterium segetis JCM 33059 Type strain
Methylococcus geothermalis JCM 33941 Type strain
Methylocystis sp. JCM 32772
Methylocystis sp. JCM 32774
Methylocystis sp. JCM 34278
"Methylolobus aquaticus" JCM 33786
"Methylomonas albis" JCM 32282 Proposed type strain
"Methylomonas fluvii" JCM 32283 Proposed type strain
"Methylomonas rhizoryzae" JCM 33990 Proposed type strain
Methylosinus sp. JCM 32771
Methylovulum psychrotolerans JCM 32281
Microbacterium stercoris JCM 32660 Type strain
Microlunatus elymi JCM 32702 Type strain
Microtetraspora sp. JCM 34240
Mobiluncus porci JCM 34379 Type strain
Mogibacterium kristiansenii JCM 34371 Type strain
Motilibacter aurantiacus JCM 33652 Type strain
Motilibacter deserti JCM 33651 Type strain
Mucilaginibacter inviolabilis JCM 34116 Type strain
Mucilaginibacter segetis JCM 34284 Type strain
Mucilaginibacter sp. JCM 17753
Mucilaginibacter sp. JCM 17754
Muricauda algicola JCM 32942 Type strain
Muricauda oceani JCM 33902 Type strain
Muricauda ochracea JCM 33817 Type strain
"Muricoprocola aceti" JCM 34980 Proposed type strain
Muriicola soli JCM 32370 Type strain
"Muriventricola aceti" JCM 34992
"Muriventricola aceti" JCM 34993 Proposed type strain
Mycoavidus sp. JCM 33615
Mycolicibacterium nivoides JCM 32796 Type strain
Myroides fluvii JCM 33306 Type strain
Nitrogeniibacter mangrovi JCM 32045 Type strain
Nitrosophilus alvini JCM 32893 Type strain
Nitrosophilus labii JCM 34002 Type strain
Nocardia aurantiaca JCM 33775 Type strain
Nocardia huaxiensis JCM 34475 Type strain
Nocardioides dongkuii JCM 33698 Type strain
Nocardioides lijunqiniae JCM 33468 Type strain
Nonomuraea terrae JCM 33876 Type strain
Noviherbaspirillum sp. JCM 17962
Novosphingobium aquimarinum JCM 33983 Type strain
Novosphingobium aureum JCM 33996 Type strain
Novosphingopyxis iocasae JCM 34178 Type strain
Oliverpabstia intestinalis JCM 34394 Type strain
Olsenella porci JCM 34369 Type strain
Olsenella sp. JCM 18680
Olsenella sp. JCM 18681
Opitutus sp. JCM 18284
Oricola thermophila JCM 33661 Type strain
"Oscillibacter acetigenes" JCM 39249
"Oscillibacter acetigenes" JCM 39250 Proposed type strain
Oscillibacter sp. JCM 17206
Paenibacillus agri JCM 34279 Type strain
Paenibacillus algicola JCM 32683 Type strain
Paenibacillus dokdonensis JCM 33533 Type strain
Paenibacillus dokdonensis JCM 34435
Paenibacillus oceani JCM 34214 Type strain
"Paenibacillus oralis" JCM 33462 Proposed type strain
Paludibacterium sp. JCM 17750
Parabacteroides acidifaciens JCM 34233 Type strain
Parabacteroides sp. JCM 19281
"Paraburkholderia bengalensis" JCM 34777
Paraburkholderia panacisoli JCM 32098 Type strain
"Paraclostridium dentum" JCM 32760 Proposed type strain
Paraflavitalea soli JCM 33061 Type strain
Parasphingopyxis marina JCM 34665 Type strain
Patiriisocius marinistellae JCM 33344 Type strain
Pedobacter sp. JCM 17665
Pelistega ratti JCM 33788 Type strain
Peptacetobacter hominis JCM 33482 Type strain
Peptoniphilus porci JCM 34366 Type strain
Peptostreptococcus porci JCM 34372 Type strain
"Persephonella atlantica" JCM 34026 Proposed type strain
"Phocaeicola fibrisolvens" JCM 34813 Proposed type strain
Pontibacter cellulosilyticus JCM 31022 Type strain
Pontirhabdus sp. JCM 18217
Pontirhabdus sp. JCM 18286
Pontivivens ytuae JCM 34320 Type strain
Porcincola intestinalis JCM 34417 Type strain
Portibacter sp. JCM 17718
Prevotella intermedia JCM 34893
Prevotella mizrahii JCM 34422 Type strain
Pseudarthrobacter psychrotolerans JCM 33881 Type strain
Pseudocitrobacter vendiensis JCM 34135 Type strain
Pseudoduganella sp. JCM 17751
Pseudoflavonifractor gallinarum JCM 34594 Type strain
Pseudomonas aeruginosa JCM 23217
Pseudomonas akapageensis JCM 33654 Type strain
Pseudomonas atagonensis JCM 33653 Type strain
Pseudomonas guryensis JCM 34509 Type strain
Pseudomonas lalkuanensis JCM 34476 Type strain
Pseudomonas nicosulfuronedens JCM 33860 Type strain
Pseudomonas schmalbachii JCM 34414 Type strain
Pseudomonas sp. JCM 17748
Pseudomonas ullengensis JCM 34510 Type strain
Pseudonocardia broussonetiae JCM 33840 Type strain
"Pseudonocardia cytotoxica" JCM 32718 Proposed type strain
Pseudoprevotella muciniphila JCM 32621 Type strain
Pseudoramibacter porci JCM 34374 Type strain
Pseudorhodobacter turbinis JCM 33168 Type strain
Psychrosphaera ytuae JCM 34321 Type strain
Pusillimonas faecalis JCM 34011 Type strain
Pusillimonas sp. JCM 17744
Pyramidobacter porci JCM 34368 Type strain
Radiobacillus deserti JCM 33497 Type strain
Rahnella sp. JCM 17749
Ramlibacter algicola JCM 33302 Type strain
"Rheinheimera pleomorphica" JCM 30460 Proposed type strain
Rheinheimera sp. JCM 17508
Rhizobium hidalgonense JCM 33660
"Rhizobium indicum" JCM 33658 Proposed type strain
"Rhizobium indicum" JCM 33659
Rhizobium sp. JCM 34405
Rhodoferax sediminis JCM 32677 Type strain
Rhodoferax sp. JCM 34246
"Roseburia amylophila" JCM 34814 Proposed type strain
Roseburia porci JCM 34376 Type strain
Roseburia sp. JCM 18684
Roseomonas algicola JCM 33309 Type strain
Ruania zhangjianzhongii JCM 33465 Type strain
Ructibacterium gallinarum JCM 34650 Type strain
Ruminiclostridium herbifermentans JCM 39124 Type strain
Ruminococcus sp. JCM 18685
Saccharospirillum sp. JCM 17202
Saccharospirillum sp. JCM 17203
Sandaracinobacter neustonicus JCM 30734 Type strain
Scrofimicrobium canadense JCM 34392 Type strain
Secundilactobacillus folii JCM 34223 Type strain
Secundilactobacillus hailunensis JCM 33864 Type strain
Secundilactobacillus yichangensis JCM 33866 Type strain
Selenomonas montiformis JCM 34373 Type strain
Sellimonas monacensis JCM 34591 Type strain
Sharpea porci JCM 34378 Type strain
Shewanella vesiculosa JCM 33296
Shimazuella alba JCM 33532 Type strain
"Sideroxydans lithotrophicus" JCM 14762
"Sideroxydans paludicola" JCM 14765
Silanimonas mangrovi JCM 17870 Type strain
Sodaliphilus pleomorphus JCM 34423 Type strain
Solibaculum mannosilyticum JCM 34081 Type strain
Sphingobium sp. JCM 17879
Sphingomonas changnyeongensis JCM 33880 Type strain
Sphingomonas profundi JCM 33666 Type strain
Sphingomonas sp. JCM 17541
Sphingomonas suaedae JCM 33850 Type strain
Sphingorhabdus sp. JCM 17542
Sphingorhabdus sp. JCM 17544
Spirosoma taeanense JCM 34024 Type strain
Staphylococcus roterodami JCM 34415 Type strain
Stecheria intestinalis JCM 34426 Type strain
Steroidobacter agaridevorans JCM 33367
Steroidobacter agaridevorans JCM 33368 Type strain
Steroidobacter gossypii JCM 34287 Type strain
Streptacidiphilus fuscans JCM 33976 Type strain
Streptomyces boncukensis JCM 34018 Type strain
Streptomyces broussonetiae JCM 33918 Type strain
"Streptomyces buecherae" JCM 34263 Proposed type strain
Streptomyces fagopyri JCM 33796 Type strain
Streptomyces genisteinicus JCM 34526 Type strain
Streptomyces liangshanensis JCM 33963 Type strain
Streptomyces roseirectus JCM 34565 Type strain
"Streptomyces soli" JCM 32822 Proposed type strain
Streptomyces xanthii JCM 34527 Type strain
"Suilimivivens aceti" JCM 34982 Proposed type strain
Suipraeoptans intestinalis JCM 34387 Type strain
"Sulfurimonas baltica" JCM 39138 Proposed type strain
"Sulfurimonas marisnigri" JCM 39139 Proposed type strain
Sulfurospirillum sp. JCM 33349
Sulfurospirillum sp. JCM 33350
"Suonthocola fibrivorans" JCM 34981 Proposed type strain
Syntrophotalea acetylenivorans JCM 33327 Type strain
Tabrizicola algicola JCM 31893 Type strain
Terrilactibacillus tamarindi JCM 33748 Type strain
Tessaracoccus coleopterorum JCM 33674 Type strain
Thauera sinicae JCM 34237 Type strain
Thermophilibacter gallinarum JCM 34593 Type strain
Thermophilibacter immobilis JCM 34224 Type strain
Thermus thermophilus JCM 34562
Thermus thermophilus JCM 34563
Thermus thermophilus JCM 34564
Thermus thermophilus JCM 34718
Thermus thermophilus JCM 34735
Thermus thermophilus JCM 34736
Thermus thermophilus JCM 34737
Thermus thermophilus JCM 34738
Thermus thermophilus JCM 34739
Thermus thermophilus JCM 34740
Thermus thermophilus JCM 34741
Thermus thermophilus JCM 34742
Thiopseudomonas sp. JCM 17747
Tissierella pigra JCM 34367 Type strain
Unidentified bacterium JCM 17375
Unidentified bacterium JCM 18881
Vagococcus silagei JCM 34857 Type strain
Veillonella nakazawae JCM 33966 Type strain
Velocimicrobium porci JCM 34420 Type strain
Vescimonas coprocola JCM 34012 Type strain
Vescimonas coprocola JCM 34013
Vescimonas coprocola JCM 34014
Vescimonas coprocola JCM 34015
Vescimonas fastidiosa JCM 34016 Type strain
Vibrio nitrifigilis JCM 33628 Type strain
Vibrio taketomensis JCM 33434 Type strain
Victivallis lenta JCM 34375 Type strain
Vulcaniibacterium tengchongense JCM 17893 Type strain
Waltera intestinalis JCM 34425 Type strain
Weissella coleopterorum JCM 33684 Type strain
Weissella muntiaci JCM 34858 Type strain
Winogradskyella ouciana JCM 33665 Type strain
Winogradskyella sp. JCM 17290
Winogradskyella sp. JCM 18218
Yangia mangrovi JCM 31345 Type strain
Yeosuana marina JCM 31511 Type strain
Zhongshania sp. JCM 17373
Zhongshania sp. JCM 17374
Zhongshania sp. JCM 17376
Archaea
"Halalkalirubrum salinum" JCM 33785 Proposed type strain
Haloarcula mannanilytica JCM 33835 Type strain
Halobaculum halophilum JCM 33550 Type strain
Halobaculum salinum JCM 33552 Type strain
"Halobellus ruber" JCM 34172 Proposed type strain
Halococcus salsus JCM 34382 Type strain
"Haloferax litoreum" JCM 34169 Proposed type strain
"Haloferax marinisediminis" JCM 34170 Proposed type strain
"Haloferax marinum" JCM 34171 Proposed type strain
"Halomicroarcula nitratireducens" JCM 33314 Proposed type strain
"Halomicroarcula rubra" JCM 33313 Proposed type strain
"Halosegnis longus" JCM 33317 Proposed type strain
"Halosegnis rubeus" JCM 33319 Proposed type strain
Halosimplex halophilum JCM 30840 Type strain
Halosimplex salinum JCM 31108 Type strain
Halovarius sp. JCM 18645
Methanohalophilus profundi JCM 32768 Type strain
Methanosarcina mazei JCM 31898
Natribaculum breve JCM 34383 Type strain
Natribaculum longum JCM 34384 Type strain
Natronomonas halophila JCM 32961 Type strain
Natronomonas salina JCM 31111 Type strain
"Natronomonas salsuginis" JCM 33320 Proposed type strain
Natronorubrum halophilum JCM 30845 Type strain
Salinadaptatus halalkaliphilus JCM 33751 Type strain
Thermococcus aciditolerans JCM 39083 Type strain
Thermofilum uzonense JCM 19810 Type strain
Fungi
Apiotrichum akiyoshidainum JCM 12595 Type strain
Apiotrichum chiropterorum JCM 12594 Type strain
Apiotrichum coprophilum JCM 12596 Type strain
Apiotrichum otae JCM 12593 Type strain
Aspergillus fumisynnematus JCM 30249
Aspergillus lentulus JCM 30254
Aspergillus sp. JCM 2271
Bullera sakaeratica JCM 11900 Type strain
Candida takamatsuzukensis JCM 28201
Cladophialophora boppii JCM 16195
Cordyceps javanica JCM 12796
Cutaneotrichosporon cavernicola JCM 12590 Type strain
Cutaneotrichosporon middelhovenii JCM 12592 Type strain
Cyberlindnera mrakii JCM 3711
Debaryomyces coudertii JCM 3665
Debaryomyces hansenii JCM 2212
Exophiala spinifera JCM 18339
Fusarium oxysporum f. sp. rapae JCM 39198
Fusarium oxysporum f. sp. raphani JCM 39197
Gliomastix masseei JCM 28012
Gliomastix masseei JCM 28014
Gliomastix masseei JCM 28015
Gliomastix masseei JCM 28016
Gliomastix masseei JCM 28019
Gliomastix masseei JCM 28022
Gliomastix masseei JCM 28023
Gliomastix masseei JCM 28024
Gliomastix masseei JCM 28025
Gliomastix masseei JCM 28026
Gliomastix masseei JCM 28027
Gliomastix masseei JCM 28028
Gliomastix masseei JCM 28029
Gliomastix masseei JCM 28030
Gliomastix masseei JCM 28031
Gliomastix masseei JCM 28032
Gliomastix masseei JCM 28033
Gliomastix masseei JCM 28035
Gliomastix masseei JCM 28036
Gliomastix masseei JCM 28038
Gliomastix masseei JCM 28039
Gliomastix masseei JCM 28041
Gliomastix masseei JCM 28042
Gliomastix masseei JCM 28045
Gliomastix masseei JCM 28062
Gliomastix masseei JCM 28535
Gliomastix murorum JCM 28069
Gliomastix murorum JCM 28070
Gliomastix murorum JCM 28468
Gliomastix murorum JCM 28538
Gliomastix murorum JCM 28555
Gliomastix tumulicola JCM 28369
Gliomastix tumulicola JCM 28371
Gliomastix tumulicola JCM 28374
Gliomastix tumulicola JCM 28470
Gliomastix tumulicola JCM 28537
Gliomastix tumulicola JCM 28576
Gliomastix tumulicola JCM 28577
Globisporangium irregulare JCM 30515
Globisporangium rostratifingens JCM 30518
Globisporangium sp. JCM 30522
Globisporangium sp. JCM 30525
Globisporangium sp. JCM 30526
Globisporangium sp. JCM 30528
Globisporangium spinosum JCM 30519
Globisporangium sylvaticum JCM 30520
Globisporangium ultimum var. ultimum JCM 30521
Graphium basitruncatum JCM 8083
Hanseniaspora guilliermondii JCM 3709
Hanseniaspora occidentalis JCM 3673
Hanseniaspora uvarum JCM 3670
Hanseniaspora uvarum JCM 3678
Hanseniaspora valbyensis JCM 3671
Hanseniaspora valbyensis JCM 3679
Hanseniaspora vineae JCM 3667
Hanseniaspora vineae JCM 3674
Hanseniaspora vineae JCM 3675
Heterocephalacria mucosa JCM 32113 Type strain
Heterocephalacria mucosa JCM 32114
Kendrickiella phycomyces JCM 28034
Kendrickiella phycomyces JCM 28046
Kendrickiella phycomyces JCM 28047
Kendrickiella phycomyces JCM 28049
Kendrickiella phycomyces JCM 28051
Kendrickiella phycomyces JCM 28335
Kendrickiella phycomyces JCM 28336
Kendrickiella phycomyces JCM 28343
Kendrickiella phycomyces JCM 28355
Kendrickiella phycomyces JCM 28356
Kendrickiella phycomyces JCM 28375
Kwoniella dendrophila JCM 5193
Metacapnodium neesii JCM 39119
Metapochonia hahajimaensis JCM 34019 ex-holotype strain
Metapochonia hahajimaensis JCM 34020
Metapochonia hahajimaensis JCM 34021
Meyerozyma guilliermondii JCM 28199
Meyerozyma guilliermondii JCM 28200
Ophiostoma sp. JCM 16786
Ophiostoma sp. JCM 16787
Ovatisporangium sp. JCM 30512
Paecilomyces pascuus JCM 12798 ex-holotype strain
Penicillium brasilianum JCM 28511
Penicillium brasilianum JCM 28512
Penicillium citrinum JCM 28364
Penicillium citrinum JCM 28476
Penicillium commune JCM 28128
Penicillium oxalicum JCM 28514
Penicillium oxalicum JCM 33849
Penicillium paneum JCM 28007
Penicillium paneum JCM 28018
Penicillium paneum JCM 28021
Penicillium paneum JCM 28043
Penicillium paneum JCM 28052
Penicillium paneum JCM 28053
Penicillium paneum JCM 28056
Penicillium paneum JCM 28057
Penicillium paneum JCM 28060
Penicillium paneum JCM 28065
Penicillium paneum JCM 28089
Penicillium paneum JCM 28094
Penicillium paneum JCM 28103
Penicillium paneum JCM 28105
Penicillium paneum JCM 28106
Penicillium paneum JCM 28107
Penicillium paneum JCM 28108
Penicillium paneum JCM 28111
Penicillium paneum JCM 28157
Penicillium paneum JCM 28372
Penicillium paneum JCM 28398
Penicillium paneum JCM 28400
Penicillium paneum JCM 28410
Penicillium paneum JCM 28457
Penicillium paneum JCM 28488
Penicillium paneum JCM 28489
Penicillium paneum JCM 28508
Penicillium paneum JCM 28541
Penicillium paneum JCM 28552
Penicillium paneum JCM 28570
Penicillium paneum JCM 28592
Penicillium paneum JCM 28593
Penicillium paneum JCM 28594
Penicillium sp. JCM 16790
Penicillium sp. JCM 16791
Penicillium sp. JCM 16792
Penicillium sp. JCM 16793
Pichia fermentans JCM 3645
Pichia membranifaciens JCM 28198
Pleurotus sp. JCM 17959
Pythium aphanidermatum JCM 30498
Pythium monospermum JCM 30501
Pythium sp. JCM 30503
Pythium sp. JCM 30504
Pythium sp. JCM 30506
Pythium sp. JCM 30507
Pythium torulosum JCM 30502
Raffaelea quercivora JCM 15682
Raffaelea quercivora JCM 15683
Raffaelea quercivora JCM 15684
Raffaelea quercivora JCM 15685
Raffaelea quercivora JCM 15686
Raffaelea quercivora JCM 16778
Raffaelea quercivora JCM 16779
Rhinocladiella similis JCM 16196
Saccharomyces paradoxus JCM 10617
Sagenomella griseoviridis JCM 28186
Sarea difformis JCM 39114
Sarea difformis JCM 39115
Schizophyllum commune JCM 22617
Scolecobasidium humicola JCM 18346
Scolecobasidium humicola JCM 18354
Scolecobasidium humicola JCM 18355
Scolecobasidium sp. JCM 18353
Talaromyces minioluteus JCM 28002
Talaromyces minioluteus JCM 28133
Talaromyces minioluteus JCM 28139
Talaromyces minioluteus JCM 28193
Termitomyces sp. JCM 11082
Termitomyces sp. JCM 11083
Termitomyces sp. JCM 11088
Termitomyces sp. JCM 11098
Termitomyces sp. JCM 11099
Termitomyces sp. JCM 11101
Termitomyces sp. JCM 11102
Termitomyces sp. JCM 11103
Termitomyces sp. JCM 11104
Termitomyces sp. JCM 11105
Termitomyces sp. JCM 11106
Termitomyces sp. JCM 11107
Termitomyces sp. JCM 11108
Termitomyces sp. JCM 11109
Termitomyces sp. JCM 11111
Termitomyces sp. JCM 11112
Termitomyces sp. JCM 11114
Termitomyces sp. JCM 11152
Termitomyces sp. JCM 11153
Termitomyces sp. JCM 11156
Termitomyces sp. JCM 11160
Termitomyces sp. JCM 14628
Termitomyces sp. JCM 14629
Trichoderma sp. JCM 16795
Tromera resinae JCM 39116
Tromera resinae JCM 39117
Tromera resinae JCM 39118
Udeniomyces megalosporus JCM 5272
Udeniomyces pyricola JCM 5267
Udeniomyces pyricola JCM 6855
Unidentified fungus JCM 16780
Unidentified fungus JCM 16781
Unidentified fungus JCM 16782
Unidentified fungus JCM 16783
Unidentified fungus JCM 16784
Unidentified fungus JCM 16785
Unidentified fungus JCM 16788
Unidentified fungus JCM 16789
Unidentified fungus JCM 16794
Unidentified fungus JCM 16796
Unidentified fungus JCM 16797
Unidentified fungus JCM 16798
Unidentified fungus JCM 16978
Unidentified fungus JCM 16979
Unidentified yeast JCM 24555
Zasmidium sp. JCM 8822
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2022.01.25
